Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0460 and DvMF_0461 are separated by 122 nucleotides DvMF_0461 and DvMF_0462 are separated by 110 nucleotides DvMF_0462 and DvMF_0463 are separated by 62 nucleotides DvMF_0463 and DvMF_0464 are separated by 134 nucleotides
DvMF_0460: DvMF_0460 - adenylate cyclase (RefSeq), at 540,063 to 540,740
_0460
DvMF_0461: DvMF_0461 - Camphor resistance CrcB protein (RefSeq), at 540,863 to 541,237
_0461
DvMF_0462: DvMF_0462 - protein of unknown function DUF190 (RefSeq), at 541,348 to 541,743
_0462
DvMF_0463: DvMF_0463 - GCN5-related N-acetyltransferase (RefSeq), at 541,806 to 542,342
_0463
DvMF_0464: DvMF_0464 - nitrite and sulphite reductase 4Fe-4S region (RefSeq), at 542,477 to 543,154
_0464
Position (kb) 541
542 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 540.637 kb on + strand, within DvMF_0460 at 540.901 kb on + strand, within DvMF_0461 at 541.173 kb on - strand, within DvMF_0461 at 541.253 kb on + strand at 541.281 kb on - strand at 541.370 kb on + strand at 541.641 kb on - strand, within DvMF_0462 at 541.738 kb on + strand at 542.136 kb on + strand, within DvMF_0463 at 542.555 kb on - strand, within DvMF_0464
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 540,637 + DvMF_0460 0.85 +0.3 540,901 + DvMF_0461 0.10 -0.7 541,173 - DvMF_0461 0.83 -1.7 541,253 + -1.4 541,281 - -1.8 541,370 + -1.2 541,641 - DvMF_0462 0.74 -1.5 541,738 + -1.1 542,136 + DvMF_0463 0.61 -3.8 542,555 - DvMF_0464 0.12 -1.7
Or see this region's nucleotide sequence