Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0456 and DvMF_0457 are separated by 31 nucleotides DvMF_0457 and DvMF_0458 overlap by 4 nucleotides DvMF_0458 and DvMF_0459 are separated by 1 nucleotides DvMF_0459 and DvMF_0460 are separated by 477 nucleotides
DvMF_0456: DvMF_0456 - hypothetical protein (RefSeq), at 535,850 to 535,969
_0456
DvMF_0457: DvMF_0457 - leucyl/phenylalanyl-tRNA/protein transferase (RefSeq), at 536,001 to 536,834
_0457
DvMF_0458: DvMF_0458 - ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq), at 536,831 to 539,281
_0458
DvMF_0459: DvMF_0459 - ATP-dependent Clp protease adaptor protein ClpS (RefSeq), at 539,283 to 539,585
_0459
DvMF_0460: DvMF_0460 - adenylate cyclase (RefSeq), at 540,063 to 540,740
_0460
Position (kb) 536
537
538
539
540 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 535.844 kb on - strand at 536.171 kb on - strand, within DvMF_0457 at 536.271 kb on - strand, within DvMF_0457 at 536.551 kb on - strand, within DvMF_0457 at 536.797 kb on - strand at 537.530 kb on - strand, within DvMF_0458 at 537.535 kb on - strand, within DvMF_0458 at 537.599 kb on + strand, within DvMF_0458 at 537.605 kb on - strand, within DvMF_0458 at 537.626 kb on - strand, within DvMF_0458 at 537.758 kb on + strand, within DvMF_0458 at 537.776 kb on - strand, within DvMF_0458 at 537.790 kb on - strand, within DvMF_0458 at 537.915 kb on - strand, within DvMF_0458 at 538.116 kb on + strand, within DvMF_0458 at 538.511 kb on - strand, within DvMF_0458 at 538.511 kb on - strand, within DvMF_0458 at 538.990 kb on - strand, within DvMF_0458 at 539.037 kb on + strand at 539.042 kb on + strand at 539.281 kb on + strand at 539.281 kb on + strand at 539.291 kb on + strand at 539.366 kb on + strand, within DvMF_0459 at 539.379 kb on - strand, within DvMF_0459 at 539.885 kb on + strand at 539.900 kb on - strand at 539.920 kb on + strand at 540.080 kb on + strand at 540.234 kb on + strand, within DvMF_0460
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 535,844 - -0.8 536,171 - DvMF_0457 0.20 +0.8 536,271 - DvMF_0457 0.32 -0.5 536,551 - DvMF_0457 0.66 +0.2 536,797 - -1.9 537,530 - DvMF_0458 0.29 -0.8 537,535 - DvMF_0458 0.29 -2.0 537,599 + DvMF_0458 0.31 -3.2 537,605 - DvMF_0458 0.32 -1.6 537,626 - DvMF_0458 0.32 -1.3 537,758 + DvMF_0458 0.38 -1.1 537,776 - DvMF_0458 0.39 -0.7 537,790 - DvMF_0458 0.39 -1.2 537,915 - DvMF_0458 0.44 -0.4 538,116 + DvMF_0458 0.52 -1.3 538,511 - DvMF_0458 0.69 -0.6 538,511 - DvMF_0458 0.69 -0.5 538,990 - DvMF_0458 0.88 -0.4 539,037 + +0.3 539,042 + -0.9 539,281 + -0.6 539,281 + +0.1 539,291 + +0.2 539,366 + DvMF_0459 0.27 +0.7 539,379 - DvMF_0459 0.32 -0.9 539,885 + -1.0 539,900 - -3.6 539,920 + -2.0 540,080 + +0.2 540,234 + DvMF_0460 0.25 +0.0
Or see this region's nucleotide sequence