Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0340 and DvMF_0341 are separated by 192 nucleotides DvMF_0341 and DvMF_0342 are separated by 359 nucleotides
DvMF_0340: DvMF_0340 - 16S ribosomal RNA methyltransferase RsmE (RefSeq), at 397,375 to 398,094
_0340
DvMF_0341: DvMF_0341 - glycine cleavage system T protein (RefSeq), at 398,287 to 399,375
_0341
DvMF_0342: DvMF_0342 - hypothetical protein (RefSeq), at 399,735 to 401,453
_0342
Position (kb) 398
399
400 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 397.399 kb on + strand at 397.523 kb on - strand, within DvMF_0340 at 398.020 kb on - strand, within DvMF_0340 at 398.049 kb on + strand at 398.101 kb on + strand at 398.220 kb on + strand at 398.293 kb on - strand at 398.312 kb on - strand at 398.316 kb on + strand at 398.426 kb on + strand, within DvMF_0341 at 398.619 kb on - strand, within DvMF_0341 at 398.844 kb on - strand, within DvMF_0341 at 398.871 kb on + strand, within DvMF_0341 at 398.916 kb on + strand, within DvMF_0341 at 398.924 kb on - strand, within DvMF_0341 at 398.924 kb on - strand, within DvMF_0341 at 398.976 kb on - strand, within DvMF_0341 at 399.015 kb on - strand, within DvMF_0341 at 399.072 kb on - strand, within DvMF_0341 at 399.105 kb on + strand, within DvMF_0341 at 399.133 kb on + strand, within DvMF_0341 at 399.166 kb on + strand, within DvMF_0341 at 399.174 kb on - strand, within DvMF_0341 at 399.290 kb on + strand at 399.332 kb on + strand at 399.340 kb on - strand at 399.619 kb on + strand at 399.766 kb on + strand at 399.872 kb on + strand at 400.037 kb on + strand, within DvMF_0342 at 400.037 kb on + strand, within DvMF_0342 at 400.037 kb on + strand, within DvMF_0342 at 400.045 kb on - strand, within DvMF_0342 at 400.045 kb on - strand, within DvMF_0342
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 397,399 + -0.1 397,523 - DvMF_0340 0.21 +0.2 398,020 - DvMF_0340 0.90 -1.4 398,049 + -1.0 398,101 + -3.1 398,220 + +0.5 398,293 - -1.7 398,312 - -0.9 398,316 + +0.3 398,426 + DvMF_0341 0.13 -1.4 398,619 - DvMF_0341 0.30 -0.6 398,844 - DvMF_0341 0.51 -0.6 398,871 + DvMF_0341 0.54 -1.9 398,916 + DvMF_0341 0.58 -0.8 398,924 - DvMF_0341 0.58 -1.3 398,924 - DvMF_0341 0.58 -1.0 398,976 - DvMF_0341 0.63 -1.3 399,015 - DvMF_0341 0.67 -0.3 399,072 - DvMF_0341 0.72 -2.3 399,105 + DvMF_0341 0.75 -1.1 399,133 + DvMF_0341 0.78 -1.2 399,166 + DvMF_0341 0.81 -1.1 399,174 - DvMF_0341 0.81 -1.7 399,290 + -0.3 399,332 + -0.2 399,340 - -3.2 399,619 + -0.3 399,766 + -0.9 399,872 + -1.2 400,037 + DvMF_0342 0.18 -0.4 400,037 + DvMF_0342 0.18 -1.6 400,037 + DvMF_0342 0.18 +1.2 400,045 - DvMF_0342 0.18 -2.0 400,045 - DvMF_0342 0.18 -0.8
Or see this region's nucleotide sequence