Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0306
Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 351,518 | + | DvMF_0305 | 0.40 | -0.7 | |
| 351,545 | - | DvMF_0305 | 0.43 | -1.0 | |
| 351,619 | - | DvMF_0305 | 0.52 | +0.6 | |
| 351,629 | - | DvMF_0305 | 0.53 | -0.6 | |
| 351,771 | + | DvMF_0305 | 0.70 | -1.4 | |
| 351,785 | + | DvMF_0305 | 0.71 | -0.3 | |
| 351,822 | - | DvMF_0305 | 0.76 | -0.7 | |
| 351,874 | + | DvMF_0305 | 0.82 | -0.6 | |
| 351,986 | + | -0.7 | |||
| 352,162 | - | -0.4 | |||
| 352,651 | - | DvMF_0306 | 0.17 | -1.7 | |
| 352,742 | + | DvMF_0306 | 0.26 | -0.9 | |
| 352,776 | - | DvMF_0306 | 0.30 | -1.6 | |
| 352,930 | - | DvMF_0306 | 0.46 | -2.1 | |
| 353,184 | + | DvMF_0306 | 0.72 | -2.4 | |
| 353,284 | + | DvMF_0306 | 0.82 | -2.0 | |
| 353,557 | + | -0.6 | |||
| 353,786 | - | -1.1 | |||
| 353,950 | + | hslU | DvMF_0307 | 0.18 | +0.1 |
| 354,111 | + | hslU | DvMF_0307 | 0.29 | -0.6 |
| 354,275 | - | hslU | DvMF_0307 | 0.41 | -0.4 |
| 354,288 | + | hslU | DvMF_0307 | 0.42 | -1.4 |
| 354,347 | + | hslU | DvMF_0307 | 0.46 | -3.5 |
Or see this region's nucleotide sequence