Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0182 and DvMF_0183 are separated by 234 nucleotides DvMF_0183 and DvMF_0184 are separated by 132 nucleotides DvMF_0184 and DvMF_0185 are separated by 57 nucleotides DvMF_0185 and DvMF_0186 are separated by 84 nucleotides
DvMF_0182: DvMF_0182 - hypothetical protein (RefSeq), at 199,674 to 199,892
_0182
DvMF_0183: DvMF_0183 - Ferroxidase (RefSeq), at 200,127 to 200,642
_0183
DvMF_0184: DvMF_0184 - pyruvate flavodoxin/ferredoxin oxidoreductase domain protein (RefSeq), at 200,775 to 202,466
_0184
DvMF_0185: DvMF_0185 - pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit (RefSeq), at 202,524 to 203,375
_0185
DvMF_0186: DvMF_0186 - hypothetical protein (RefSeq), at 203,460 to 203,807
_0186
Position (kb) 200
201
202
203 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 199.912 kb on + strand at 199.933 kb on - strand at 200.114 kb on + strand at 200.201 kb on + strand, within DvMF_0183 at 200.279 kb on - strand, within DvMF_0183 at 200.571 kb on - strand, within DvMF_0183 at 200.609 kb on + strand at 200.795 kb on - strand at 200.856 kb on + strand at 200.872 kb on + strand at 201.083 kb on + strand, within DvMF_0184 at 201.258 kb on - strand, within DvMF_0184 at 201.474 kb on - strand, within DvMF_0184 at 201.782 kb on - strand, within DvMF_0184 at 202.138 kb on - strand, within DvMF_0184 at 202.261 kb on + strand, within DvMF_0184 at 202.279 kb on - strand, within DvMF_0184 at 202.279 kb on - strand, within DvMF_0184 at 202.295 kb on + strand, within DvMF_0184 at 202.295 kb on + strand, within DvMF_0184 at 202.303 kb on - strand at 202.407 kb on + strand at 202.461 kb on + strand at 202.558 kb on - strand at 202.747 kb on + strand, within DvMF_0185 at 202.981 kb on - strand, within DvMF_0185 at 203.371 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 199,912 + -0.6 199,933 - -0.9 200,114 + -0.6 200,201 + DvMF_0183 0.14 -0.1 200,279 - DvMF_0183 0.29 -0.6 200,571 - DvMF_0183 0.86 +0.8 200,609 + -0.8 200,795 - -0.8 200,856 + -0.5 200,872 + -0.2 201,083 + DvMF_0184 0.18 -1.8 201,258 - DvMF_0184 0.29 -3.1 201,474 - DvMF_0184 0.41 -0.7 201,782 - DvMF_0184 0.60 -1.6 202,138 - DvMF_0184 0.81 -3.8 202,261 + DvMF_0184 0.88 -1.1 202,279 - DvMF_0184 0.89 -1.1 202,279 - DvMF_0184 0.89 -0.6 202,295 + DvMF_0184 0.90 -0.3 202,295 + DvMF_0184 0.90 -0.4 202,303 - -0.3 202,407 + -0.9 202,461 + -0.1 202,558 - +0.0 202,747 + DvMF_0185 0.26 -0.5 202,981 - DvMF_0185 0.54 -0.7 203,371 - -0.4
Or see this region's nucleotide sequence