Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0113 and DvMF_0114 are separated by 22 nucleotides DvMF_0114 and DvMF_0115 are separated by 17 nucleotides DvMF_0115 and DvMF_0116 are separated by 402 nucleotides
DvMF_0113: DvMF_0113 - hypothetical protein (RefSeq), at 124,755 to 125,330
_0113
DvMF_0114: DvMF_0114 - hypothetical protein (RefSeq), at 125,353 to 125,619
_0114
DvMF_0115: DvMF_0115 - hypothetical protein (RefSeq), at 125,637 to 126,578
_0115
DvMF_0116: DvMF_0116 - ferric uptake regulator, Fur family (RefSeq), at 126,981 to 127,409
_0116
Position (kb) 125
126
127 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 124.789 kb on + strand at 124.854 kb on + strand, within DvMF_0113 at 124.869 kb on - strand, within DvMF_0113 at 125.031 kb on + strand, within DvMF_0113 at 125.032 kb on + strand, within DvMF_0113 at 125.035 kb on - strand, within DvMF_0113 at 125.209 kb on - strand, within DvMF_0113 at 125.270 kb on - strand, within DvMF_0113 at 125.398 kb on + strand, within DvMF_0114 at 125.485 kb on - strand, within DvMF_0114 at 125.719 kb on - strand at 125.762 kb on + strand, within DvMF_0115 at 125.875 kb on + strand, within DvMF_0115 at 126.089 kb on - strand, within DvMF_0115 at 126.463 kb on - strand, within DvMF_0115 at 126.481 kb on + strand, within DvMF_0115 at 126.514 kb on + strand at 126.999 kb on + strand at 127.234 kb on - strand, within DvMF_0116 at 127.252 kb on - strand, within DvMF_0116 at 127.287 kb on - strand, within DvMF_0116 at 127.311 kb on + strand, within DvMF_0116 at 127.314 kb on - strand, within DvMF_0116 at 127.457 kb on + strand at 127.488 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 124,789 + +0.2 124,854 + DvMF_0113 0.17 -1.7 124,869 - DvMF_0113 0.20 -0.3 125,031 + DvMF_0113 0.48 -0.9 125,032 + DvMF_0113 0.48 +0.0 125,035 - DvMF_0113 0.49 -1.4 125,209 - DvMF_0113 0.79 -0.8 125,270 - DvMF_0113 0.89 -0.7 125,398 + DvMF_0114 0.17 -1.4 125,485 - DvMF_0114 0.49 -1.1 125,719 - -0.4 125,762 + DvMF_0115 0.13 -0.8 125,875 + DvMF_0115 0.25 -1.2 126,089 - DvMF_0115 0.48 -2.1 126,463 - DvMF_0115 0.88 -1.1 126,481 + DvMF_0115 0.90 -4.8 126,514 + -0.3 126,999 + +0.5 127,234 - DvMF_0116 0.59 -1.3 127,252 - DvMF_0116 0.63 -0.4 127,287 - DvMF_0116 0.71 -0.5 127,311 + DvMF_0116 0.77 +0.2 127,314 - DvMF_0116 0.78 -0.8 127,457 + -0.7 127,488 - -0.7
Or see this region's nucleotide sequence