Strain Fitness in Shewanella amazonensis SB2B around Sama_3631

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,273,837	+		Sama_3629	0.76	-0.0
4,273,837	+		Sama_3629	0.76	-2.2
4,273,837	+		Sama_3629	0.76	-0.2
4,273,838	-		Sama_3629	0.76	+2.2
4,273,872	+		Sama_3629	0.81	-1.1
4,273,872	+		Sama_3629	0.81	+1.3
4,273,872	+		Sama_3629	0.81	-0.9
4,273,873	-		Sama_3629	0.81	+0.6
4,273,873	-		Sama_3629	0.81	+0.5
4,273,873	-		Sama_3629	0.81	-0.2
4,273,873	-		Sama_3629	0.81	-0.6
4,273,873	-		Sama_3629	0.81	+0.0
4,273,891	-		Sama_3629	0.83	-1.2
4,273,925	+		Sama_3629	0.88	-0.1
4,273,925	+		Sama_3629	0.88	-1.1
4,273,959	+				+0.2
4,273,959	+				-0.5
4,273,959	+				+0.9
4,273,960	-				+0.0
4,273,960	-				+1.3
4,273,985	+				-1.1
4,273,997	+				+0.9
4,273,997	+				+1.4
4,273,997	+				+2.8
4,274,003	-				-0.1
4,274,003	-				-2.9
4,274,003	-				-3.5
4,274,003	-				+1.6
4,274,068	-				-2.5
4,274,068	-				+0.2
4,274,068	-				-1.5
4,274,140	+		Sama_3630	0.14	-3.0
4,274,140	+		Sama_3630	0.14	-0.6
4,274,140	+		Sama_3630	0.14	+3.9
4,274,140	+		Sama_3630	0.14	-0.2
4,274,140	+		Sama_3630	0.14	-2.7
4,274,141	-		Sama_3630	0.14	-1.6
4,274,141	-		Sama_3630	0.14	+1.2
4,274,141	-		Sama_3630	0.14	+0.4
4,274,141	-		Sama_3630	0.14	+0.9
4,274,141	-		Sama_3630	0.14	-0.7
4,274,141	-		Sama_3630	0.14	+1.7
4,274,141	-		Sama_3630	0.14	+0.7
4,274,141	-		Sama_3630	0.14	-0.7
4,274,141	-		Sama_3630	0.14	-0.1
4,274,169	+		Sama_3630	0.19	+2.9
4,274,170	-		Sama_3630	0.20	+1.5
4,274,170	-		Sama_3630	0.20	-2.3
4,274,170	-		Sama_3630	0.20	+0.7
4,274,181	+		Sama_3630	0.22	-1.2
4,274,181	+		Sama_3630	0.22	-1.2
4,274,181	+		Sama_3630	0.22	+1.4
4,274,181	+		Sama_3630	0.22	-0.2
4,274,181	+		Sama_3630	0.22	-0.4
4,274,182	-		Sama_3630	0.22	-0.2
4,274,182	-		Sama_3630	0.22	-1.6
4,274,182	-		Sama_3630	0.22	-1.2
4,274,192	+		Sama_3630	0.24	-2.5
4,274,192	+		Sama_3630	0.24	-2.1
4,274,192	+		Sama_3630	0.24	-2.3
4,274,192	+		Sama_3630	0.24	-0.6
4,274,192	+		Sama_3630	0.24	-2.5
4,274,193	-		Sama_3630	0.24	-0.5
4,274,281	-		Sama_3630	0.40	+0.9
4,274,397	+		Sama_3630	0.61	-0.3
4,274,397	+		Sama_3630	0.61	+1.0
4,274,397	+		Sama_3630	0.61	-1.2
4,274,397	+		Sama_3630	0.61	-0.5
4,274,397	+		Sama_3630	0.61	+0.7
4,274,398	-		Sama_3630	0.61	+2.1
4,274,398	-		Sama_3630	0.61	-0.9
4,274,398	-		Sama_3630	0.61	+1.3
4,274,403	+		Sama_3630	0.62	+3.1
4,274,425	+		Sama_3630	0.66	+0.4
4,274,425	+		Sama_3630	0.66	-1.8
4,274,425	+		Sama_3630	0.66	+0.6
4,274,426	-		Sama_3630	0.66	+0.1
4,274,426	-		Sama_3630	0.66	-1.1
4,274,426	-		Sama_3630	0.66	+0.7
4,274,430	+		Sama_3630	0.67	+1.4
4,274,430	+		Sama_3630	0.67	-1.7
4,274,431	-		Sama_3630	0.67	+1.3
4,274,431	-		Sama_3630	0.67	+2.4
4,274,431	-		Sama_3630	0.67	-0.7
4,274,454	+		Sama_3630	0.71	+2.4
4,274,455	-		Sama_3630	0.71	-0.4
4,274,492	+		Sama_3630	0.78	+1.2
4,274,492	+		Sama_3630	0.78	+1.4
4,274,492	+		Sama_3630	0.78	-0.9
4,274,493	-		Sama_3630	0.78	-2.1
4,274,493	-		Sama_3630	0.78	+0.8
4,274,493	-		Sama_3630	0.78	-1.8
4,274,527	-		Sama_3630	0.84	-0.5
4,274,538	+		Sama_3630	0.86	-0.9
4,274,560	+				-1.4
4,274,560	+				-1.4
4,274,561	-				+0.9
4,274,561	-				-2.5
4,274,602	+				+1.1
4,274,602	+				-2.1
4,274,602	+				-1.3
4,274,602	+				-1.4
4,274,602	+				+2.6
4,274,603	-				-1.2
4,274,603	-				-1.2
4,274,603	-				-0.9
4,274,603	-				+0.0
4,274,603	-				-2.2
4,274,603	-				-0.2
4,274,603	-				-1.3
4,274,606	+				-0.9
4,274,606	+				-0.5
4,274,606	+				-0.7
4,274,606	+				+0.4
4,274,606	+				-1.6
4,274,606	+				+0.2
4,274,607	-				+2.4
4,274,607	-				+0.5
4,274,607	-				+0.3
4,274,607	-				-1.1
4,274,635	+				+1.2
4,274,635	+				-1.5
4,274,635	+				+0.4
4,274,635	+				+2.9
4,274,636	-				-2.8
4,274,636	-				+1.6
4,274,636	-				+1.2
4,274,636	-				+0.8
4,274,664	+				+1.9
4,274,665	-				+0.4
4,274,666	+				-1.2
4,274,666	+				-2.4
4,274,666	+				-1.7
4,274,666	+				+1.4
4,274,666	+				+0.8
4,274,666	+				+3.1
4,274,666	+				-0.2
4,274,666	+				+0.4
4,274,666	+				+2.6
4,274,667	-				-0.1
4,274,667	-				-0.3
4,274,667	-				-2.6
4,274,667	-				+0.2
4,274,667	-				+1.2
4,274,667	-				-0.1
4,274,667	-				-0.7
4,274,682	-				+0.7
4,274,689	+				+1.5
4,274,719	+				-1.8
4,274,720	-				+0.9
4,274,720	-				+0.5
4,274,720	-				+1.4
4,274,720	-				+1.7
4,274,724	+				-0.2
4,274,724	+				+1.5
4,274,724	+				-2.4
4,274,724	+				-2.8
4,274,725	-				+0.4
4,274,725	-				+2.0
4,274,725	-				-0.2
4,274,725	-				+0.1
4,274,771	+		Sama_3631	0.11	-0.1
4,274,771	+		Sama_3631	0.11	-2.4
4,274,771	+		Sama_3631	0.11	+0.6
4,274,771	+		Sama_3631	0.11	-2.9
4,274,772	-		Sama_3631	0.12	-1.8
4,274,772	-		Sama_3631	0.12	-0.6
4,274,804	+		Sama_3631	0.17	-1.4
4,274,804	+		Sama_3631	0.17	+0.6
4,274,857	+		Sama_3631	0.25	+0.8
4,274,857	+		Sama_3631	0.25	-2.1
4,274,908	-		Sama_3631	0.33	+1.2
4,274,923	+		Sama_3631	0.36	+1.3
4,274,923	+		Sama_3631	0.36	+2.2
4,274,924	-		Sama_3631	0.36	-0.9
4,274,944	-		Sama_3631	0.39	-0.6
4,274,953	-		Sama_3631	0.41	-2.9
4,275,067	+		Sama_3631	0.59	-0.6
4,275,067	+		Sama_3631	0.59	+0.8
4,275,067	+		Sama_3631	0.59	-1.8
4,275,067	+		Sama_3631	0.59	+1.4
4,275,068	-		Sama_3631	0.59	-0.3
4,275,068	-		Sama_3631	0.59	-2.1
4,275,116	+		Sama_3631	0.67	+0.1
4,275,116	+		Sama_3631	0.67	-2.4
4,275,155	-		Sama_3631	0.73	+1.2
4,275,164	+		Sama_3631	0.74	-0.2
4,275,164	+		Sama_3631	0.74	-1.4
4,275,164	+		Sama_3631	0.74	+0.4
4,275,165	-		Sama_3631	0.75	-1.8
4,275,201	+		Sama_3631	0.80	-0.7
4,275,311	+				+0.7
4,275,321	+				-0.2
4,275,342	+				+0.0
4,275,342	+				-2.9
4,275,342	+				-0.4
4,275,342	+				-0.4
4,275,434	+		Sama_3632	0.10	+0.8
4,275,434	+		Sama_3632	0.10	+1.5
4,275,434	+		Sama_3632	0.10	+0.4
4,275,434	+		Sama_3632	0.10	-2.9
4,275,435	-		Sama_3632	0.10	-1.4
4,275,435	-		Sama_3632	0.10	+0.0
4,275,435	-		Sama_3632	0.10	+1.7
4,275,435	-		Sama_3632	0.10	+1.9
4,275,459	+		Sama_3632	0.12	+0.6
4,275,460	-		Sama_3632	0.12	+0.5
4,275,465	+		Sama_3632	0.13	+0.4
4,275,465	+		Sama_3632	0.13	+0.5
4,275,466	-		Sama_3632	0.13	-0.1
4,275,466	-		Sama_3632	0.13	-3.3
4,275,467	+		Sama_3632	0.13	+0.4
4,275,467	+		Sama_3632	0.13	-1.9
4,275,468	-		Sama_3632	0.13	-1.4
4,275,468	-		Sama_3632	0.13	-0.6
4,275,526	-		Sama_3632	0.18	-3.7
4,275,526	-		Sama_3632	0.18	-0.9
4,275,557	+		Sama_3632	0.21	+0.3
4,275,558	-		Sama_3632	0.21	+0.8
4,275,558	-		Sama_3632	0.21	-1.2
4,275,569	+		Sama_3632	0.22	-2.1
4,275,570	-		Sama_3632	0.22	-1.8
4,275,570	-		Sama_3632	0.22	+1.2
4,275,570	-		Sama_3632	0.22	-2.8
4,275,611	-		Sama_3632	0.25	-0.4
4,275,616	+		Sama_3632	0.26	-1.9
4,275,616	+		Sama_3632	0.26	+0.4
4,275,617	-		Sama_3632	0.26	-1.4
4,275,617	-		Sama_3632	0.26	+1.8
4,275,624	+		Sama_3632	0.26	-2.3
4,275,661	+		Sama_3632	0.29	-1.8
4,275,662	-		Sama_3632	0.30	-1.3
4,275,662	-		Sama_3632	0.30	+1.2
4,275,662	-		Sama_3632	0.30	+2.3
4,275,666	+		Sama_3632	0.30	+1.3
4,275,677	+		Sama_3632	0.31	-1.8
4,275,677	+		Sama_3632	0.31	-2.4
4,275,677	+		Sama_3632	0.31	-0.4
4,275,677	+		Sama_3632	0.31	+1.4
4,275,678	-		Sama_3632	0.31	+1.0
4,275,678	-		Sama_3632	0.31	+0.1
4,275,690	-		Sama_3632	0.32	-0.2
4,275,690	-		Sama_3632	0.32	-1.8
4,275,709	+		Sama_3632	0.34	+0.6
4,275,709	+		Sama_3632	0.34	-2.7
4,275,710	-		Sama_3632	0.34	+2.0
4,275,710	-		Sama_3632	0.34	-1.8
4,275,710	-		Sama_3632	0.34	+0.8
4,275,710	-		Sama_3632	0.34	-0.6
4,275,736	+		Sama_3632	0.36	-2.0
4,275,736	+		Sama_3632	0.36	+1.2
4,275,736	+		Sama_3632	0.36	+1.0
4,275,736	+		Sama_3632	0.36	-0.2
4,275,737	-		Sama_3632	0.36	+1.2
4,275,737	-		Sama_3632	0.36	+3.2
4,275,737	-		Sama_3632	0.36	-0.1
4,275,737	-		Sama_3632	0.36	-0.9
4,275,737	-		Sama_3632	0.36	+1.4
4,275,769	-		Sama_3632	0.39	-0.2
4,275,769	-		Sama_3632	0.39	-3.0
4,275,771	+		Sama_3632	0.39	-1.9
4,275,807	+		Sama_3632	0.42	-2.6
4,275,807	+		Sama_3632	0.42	+1.6
4,275,808	-		Sama_3632	0.42	-3.1
4,275,833	+		Sama_3632	0.44	+1.3
4,275,833	+		Sama_3632	0.44	-1.9
4,275,833	+		Sama_3632	0.44	+2.4
4,275,833	+		Sama_3632	0.44	-0.5
4,275,833	+		Sama_3632	0.44	-1.0
4,275,834	-		Sama_3632	0.44	-0.8
4,275,834	-		Sama_3632	0.44	+1.8
4,275,855	+		Sama_3632	0.46	+1.7
4,275,855	+		Sama_3632	0.46	-0.5
4,275,856	-		Sama_3632	0.46	-0.8
4,275,856	-		Sama_3632	0.46	+0.9
4,275,867	+		Sama_3632	0.47	-2.1
4,275,868	-		Sama_3632	0.47	+0.2
4,275,868	-		Sama_3632	0.47	+0.4
4,275,878	-		Sama_3632	0.48	+0.8
4,275,892	+		Sama_3632	0.49	-0.1
4,275,892	+		Sama_3632	0.49	+1.2
4,275,892	+		Sama_3632	0.49	+2.0
4,275,892	+		Sama_3632	0.49	+1.6
4,275,892	+		Sama_3632	0.49	+1.8
4,275,893	-		Sama_3632	0.49	-1.9
4,275,893	-		Sama_3632	0.49	+0.9
4,275,893	-		Sama_3632	0.49	+0.4
4,275,893	-		Sama_3632	0.49	+1.0
4,275,893	-		Sama_3632	0.49	+0.8
4,275,920	+		Sama_3632	0.51	-0.9
4,275,920	+		Sama_3632	0.51	+0.7
4,275,920	+		Sama_3632	0.51	-2.1
4,275,920	+		Sama_3632	0.51	-2.7
4,275,920	+		Sama_3632	0.51	+0.9
4,275,921	-		Sama_3632	0.51	-0.2
4,275,921	-		Sama_3632	0.51	+0.9
4,275,921	-		Sama_3632	0.51	-1.8
4,275,921	-		Sama_3632	0.51	+0.1
4,275,921	-		Sama_3632	0.51	+2.0
4,275,921	-		Sama_3632	0.51	+0.3
4,275,921	-		Sama_3632	0.51	-2.2
4,275,921	-		Sama_3632	0.51	-1.0
4,275,958	-		Sama_3632	0.55	+1.4
4,275,958	-		Sama_3632	0.55	-2.1
4,275,958	-		Sama_3632	0.55	-0.0
4,275,958	-		Sama_3632	0.55	-1.5
4,275,958	-		Sama_3632	0.55	-3.0
4,275,976	+		Sama_3632	0.56	-1.4
4,275,976	+		Sama_3632	0.56	-1.9
4,275,976	+		Sama_3632	0.56	-0.1
4,275,976	+		Sama_3632	0.56	+0.8
4,275,976	+		Sama_3632	0.56	+2.1
4,275,976	+		Sama_3632	0.56	-2.9
4,275,976	+		Sama_3632	0.56	+3.3
4,275,976	+		Sama_3632	0.56	+2.5
4,275,976	+		Sama_3632	0.56	+0.5
4,275,976	+		Sama_3632	0.56	-3.2
4,275,976	+		Sama_3632	0.56	+0.8
4,275,976	+		Sama_3632	0.56	+0.3
4,275,977	-		Sama_3632	0.56	-1.2
4,275,977	-		Sama_3632	0.56	+1.2
4,275,977	-		Sama_3632	0.56	+0.1
4,275,977	-		Sama_3632	0.56	-2.7
4,275,977	-		Sama_3632	0.56	+3.0
4,275,977	-		Sama_3632	0.56	+3.6
4,275,977	-		Sama_3632	0.56	+0.0
4,275,977	-		Sama_3632	0.56	-0.4
4,276,096	-		Sama_3632	0.66	-2.4
4,276,167	+		Sama_3632	0.72	+4.6
4,276,168	-		Sama_3632	0.72	+0.6
4,276,168	-		Sama_3632	0.72	-3.1
4,276,168	-		Sama_3632	0.72	+2.4
4,276,211	+		Sama_3632	0.76	-2.3
4,276,211	+		Sama_3632	0.76	-1.2
4,276,215	+		Sama_3632	0.76	-3.2
4,276,215	+		Sama_3632	0.76	-0.7
4,276,215	+		Sama_3632	0.76	-2.8
4,276,216	-		Sama_3632	0.76	+0.2
4,276,216	-		Sama_3632	0.76	+2.3
4,276,216	-		Sama_3632	0.76	+1.6
4,276,216	-		Sama_3632	0.76	-2.7
4,276,225	-		Sama_3632	0.77	-1.8
4,276,231	+		Sama_3632	0.78	+2.4
4,276,231	+		Sama_3632	0.78	-1.4
4,276,231	+		Sama_3632	0.78	-0.1
4,276,231	+		Sama_3632	0.78	+1.5
4,276,232	-		Sama_3632	0.78	+2.9
4,276,232	-		Sama_3632	0.78	-0.4
4,276,232	-		Sama_3632	0.78	+0.4
4,276,232	-		Sama_3632	0.78	+2.1
4,276,232	-		Sama_3632	0.78	-0.6
4,276,234	+		Sama_3632	0.78	-1.4
4,276,234	+		Sama_3632	0.78	-3.3
4,276,234	+		Sama_3632	0.78	+2.2
4,276,234	+		Sama_3632	0.78	+1.5
4,276,235	-		Sama_3632	0.78	+0.1
4,276,235	-		Sama_3632	0.78	+1.7
4,276,235	-		Sama_3632	0.78	-0.4
4,276,248	+		Sama_3632	0.79	+0.3
4,276,248	+		Sama_3632	0.79	+1.5
4,276,249	-		Sama_3632	0.79	+0.7
4,276,249	-		Sama_3632	0.79	-1.4
4,276,249	-		Sama_3632	0.79	-0.7
4,276,251	+		Sama_3632	0.79	+2.2
4,276,251	+		Sama_3632	0.79	+0.8
4,276,251	+		Sama_3632	0.79	+1.4
4,276,251	+		Sama_3632	0.79	+2.8
4,276,252	-		Sama_3632	0.79	-1.6
4,276,252	-		Sama_3632	0.79	-2.8
4,276,252	-		Sama_3632	0.79	+1.5