Strain Fitness in Shewanella amazonensis SB2B around Sama_2737

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,269,084	+				-1.7
3,269,085	-				+2.2
3,269,085	-				-1.7
3,269,094	+				+2.1
3,269,094	+				-1.3
3,269,094	+				-1.2
3,269,120	+				-1.2
3,269,164	-				+1.2
3,269,213	+				-0.3
3,269,214	-				+0.6
3,269,273	+				+0.1
3,269,274	-				+1.8
3,269,275	+				-1.9
3,269,275	+				+0.1
3,269,275	+				+0.8
3,269,275	+				-2.7
3,269,275	+				-1.7
3,269,275	+				-2.2
3,269,275	+				-1.0
3,269,275	+				+1.7
3,269,276	-				-2.1
3,269,278	+				-1.2
3,269,981	+				-1.1
3,269,981	+				+1.8
3,269,982	-				-0.5
3,269,986	+				+2.2
3,269,986	+				-0.5
3,269,987	-				+1.6
3,270,176	+				-1.2
3,270,176	+				-0.2
3,270,177	-				+2.2
3,270,244	-		Sama_2737	0.11	+0.8
3,270,244	-		Sama_2737	0.11	-2.7
3,270,273	+		Sama_2737	0.12	+1.1
3,270,273	+		Sama_2737	0.12	-0.3
3,270,273	+		Sama_2737	0.12	-3.4
3,270,274	-		Sama_2737	0.12	+1.5
3,270,274	-		Sama_2737	0.12	-2.4
3,270,274	-		Sama_2737	0.12	-1.0
3,270,274	-		Sama_2737	0.12	-0.1
3,270,274	-		Sama_2737	0.12	-1.5
3,270,341	+		Sama_2737	0.16	-2.8
3,270,368	-		Sama_2737	0.18	-0.3
3,270,528	-		Sama_2737	0.27	+0.2
3,270,572	+		Sama_2737	0.30	+0.4
3,270,573	-		Sama_2737	0.30	-1.9
3,270,573	-		Sama_2737	0.30	-0.6
3,270,606	+		Sama_2737	0.32	+2.1
3,270,606	+		Sama_2737	0.32	-2.6
3,270,607	-		Sama_2737	0.32	-2.2
3,270,652	+		Sama_2737	0.34	+2.3
3,270,652	+		Sama_2737	0.34	+0.5
3,270,652	+		Sama_2737	0.34	+1.5
3,270,652	+		Sama_2737	0.34	+1.1
3,270,652	+		Sama_2737	0.34	-1.1
3,270,652	+		Sama_2737	0.34	+1.1
3,270,653	-		Sama_2737	0.34	-2.3
3,270,653	-		Sama_2737	0.34	-1.0
3,270,653	-		Sama_2737	0.34	+2.4
3,270,684	+		Sama_2737	0.36	-0.5
3,270,685	-		Sama_2737	0.36	-1.9
3,270,685	-		Sama_2737	0.36	-2.1
3,270,713	-		Sama_2737	0.38	-0.9
3,270,720	+		Sama_2737	0.38	-1.2
3,270,721	-		Sama_2737	0.38	-1.4
3,270,721	-		Sama_2737	0.38	+0.7
3,270,721	-		Sama_2737	0.38	-1.0
3,270,771	+		Sama_2737	0.41	-0.5
3,270,772	-		Sama_2737	0.41	-1.9
3,270,818	+		Sama_2737	0.44	+0.1
3,270,818	+		Sama_2737	0.44	-2.4
3,270,818	+		Sama_2737	0.44	-1.5
3,270,853	+		Sama_2737	0.46	+0.8
3,270,853	+		Sama_2737	0.46	-1.7
3,270,853	+		Sama_2737	0.46	+4.1
3,270,853	+		Sama_2737	0.46	+2.0
3,270,854	-		Sama_2737	0.46	-0.5
3,270,854	-		Sama_2737	0.46	+1.7
3,270,854	-		Sama_2737	0.46	-3.4
3,270,854	-		Sama_2737	0.46	-0.5
3,270,854	-		Sama_2737	0.46	-1.9
3,270,854	-		Sama_2737	0.46	-1.1
3,270,854	-		Sama_2737	0.46	-1.7
3,270,974	+		Sama_2737	0.53	-0.7
3,271,037	+		Sama_2737	0.57	+0.8
3,271,038	-		Sama_2737	0.57	-0.5
3,271,038	-		Sama_2737	0.57	+1.2
3,271,038	-		Sama_2737	0.57	+0.9
3,271,107	+		Sama_2737	0.61	-1.9
3,271,107	+		Sama_2737	0.61	-0.6
3,271,107	+		Sama_2737	0.61	+0.4
3,271,108	-		Sama_2737	0.61	-1.5
3,271,110	+		Sama_2737	0.61	-3.1
3,271,110	+		Sama_2737	0.61	+1.1
3,271,110	+		Sama_2737	0.61	-0.9
3,271,110	+		Sama_2737	0.61	-2.7
3,271,110	+		Sama_2737	0.61	-1.7
3,271,110	+		Sama_2737	0.61	+2.7
3,271,110	+		Sama_2737	0.61	-0.5
3,271,110	+		Sama_2737	0.61	+0.7
3,271,110	+		Sama_2737	0.61	-1.5
3,271,110	+		Sama_2737	0.61	-2.4
3,271,110	+		Sama_2737	0.61	+0.6
3,271,110	+		Sama_2737	0.61	-0.8
3,271,110	+		Sama_2737	0.61	-0.7
3,271,110	+		Sama_2737	0.61	-0.9
3,271,111	-		Sama_2737	0.61	-0.9
3,271,111	-		Sama_2737	0.61	-0.5
3,271,111	-		Sama_2737	0.61	+0.9
3,271,111	-		Sama_2737	0.61	-1.1
3,271,111	-		Sama_2737	0.61	-2.6
3,271,111	-		Sama_2737	0.61	+2.0
3,271,111	-		Sama_2737	0.61	-0.6
3,271,111	-		Sama_2737	0.61	-0.5
3,271,111	-		Sama_2737	0.61	-0.5
3,271,111	-		Sama_2737	0.61	-1.9
3,271,111	-		Sama_2737	0.61	+0.8
3,271,111	-		Sama_2737	0.61	+0.8
3,271,144	-		Sama_2737	0.63	-0.6
3,271,144	-		Sama_2737	0.63	-2.5
3,271,144	-		Sama_2737	0.63	-3.8
3,271,145	+		Sama_2737	0.63	-2.2
3,271,145	+		Sama_2737	0.63	-1.7
3,271,146	-		Sama_2737	0.63	-3.4
3,271,146	-		Sama_2737	0.63	+0.8
3,271,204	+		Sama_2737	0.66	-0.5
3,271,204	+		Sama_2737	0.66	-1.1
3,271,204	+		Sama_2737	0.66	+0.4
3,271,268	+		Sama_2737	0.70	-1.2
3,271,269	-		Sama_2737	0.70	-0.7
3,271,272	+		Sama_2737	0.70	-2.2
3,271,272	+		Sama_2737	0.70	+2.1
3,271,272	+		Sama_2737	0.70	-3.4
3,271,272	+		Sama_2737	0.70	+2.2
3,271,272	+		Sama_2737	0.70	+1.4
3,271,272	+		Sama_2737	0.70	+1.8
3,271,272	+		Sama_2737	0.70	-0.7
3,271,272	+		Sama_2737	0.70	-1.2
3,271,273	-		Sama_2737	0.70	-1.3
3,271,377	-		Sama_2737	0.76	-2.6
3,271,395	-		Sama_2737	0.77	-0.6
3,271,395	-		Sama_2737	0.77	+1.3
3,271,456	+		Sama_2737	0.81	-1.2
3,271,476	-		Sama_2737	0.82	+0.8
3,271,476	-		Sama_2737	0.82	+0.9
3,271,497	-		Sama_2737	0.83	-3.4
3,271,574	+		Sama_2737	0.88	+0.7
3,271,574	+		Sama_2737	0.88	+0.6
3,271,574	+		Sama_2737	0.88	-2.4
3,271,575	-		Sama_2737	0.88	+0.5
3,271,575	-		Sama_2737	0.88	-4.1
3,271,634	+				-0.5
3,271,634	+				-0.9
3,271,634	+				-1.0
3,271,634	+				-0.4
3,271,634	+				-2.8
3,271,634	+				+0.3
3,271,634	+				-1.2
3,271,634	+				-1.9
3,271,634	+				-0.3
3,271,635	-				-1.7
3,271,635	-				+2.2
3,271,635	-				-0.8
3,271,687	-				+0.2
3,271,714	-				-2.1
3,271,714	-				-2.8
3,271,777	+				+2.2
3,271,777	+				-0.6
3,271,777	+				-0.5
3,271,777	+				-1.7
3,271,778	-				-0.6
3,271,778	-				+1.1
3,271,821	+				-0.2
3,271,821	+				+1.1
3,271,821	+				+0.1
3,271,821	+				+0.7
3,271,822	-				-1.6
3,271,822	-				-0.5
3,271,822	-				-1.1
3,271,822	-				+2.5
3,271,822	-				-1.0
3,271,822	-				+0.8
3,271,822	-				-1.5
3,271,822	-				+0.1
3,271,873	+				+0.5
3,271,977	+		Sama_2738	0.14	-1.1
3,271,978	-		Sama_2738	0.15	+2.4
3,272,002	+		Sama_2738	0.18	-1.9
3,272,003	-		Sama_2738	0.18	-0.5
3,272,131	-		Sama_2738	0.36	+0.3
3,272,131	-		Sama_2738	0.36	-1.5
3,272,181	-		Sama_2738	0.42	-2.2
3,272,182	+		Sama_2738	0.43	-1.6
3,272,183	-		Sama_2738	0.43	+0.9
3,272,183	-		Sama_2738	0.43	-0.2
3,272,215	+		Sama_2738	0.47	-1.7
3,272,271	-		Sama_2738	0.55	-2.1
3,272,271	-		Sama_2738	0.55	-2.6
3,272,368	+		Sama_2738	0.68	-2.2
3,272,369	-		Sama_2738	0.68	+1.5
3,272,410	+		Sama_2738	0.74	-2.6
3,272,410	+		Sama_2738	0.74	+1.9
3,272,411	-		Sama_2738	0.74	-2.7
3,272,411	-		Sama_2738	0.74	-0.3
3,272,629	+				-0.9
3,272,630	-				-0.8
3,272,630	-				+0.6
3,272,630	-				+1.0
3,272,641	+				-1.5
3,272,643	+				-2.4
3,272,643	+				-2.2
3,272,643	+				-1.4
3,272,643	+				-2.9
3,272,644	-				+1.5
3,272,644	-				+0.3
3,272,644	-				+0.3
3,272,644	-				+1.4
3,272,644	-				-1.4
3,272,696	+				-2.0
3,272,697	-				-0.6
3,272,714	+				+1.1
3,272,714	+				-1.2
3,272,715	-				+1.3