Strain Fitness in Shewanella amazonensis SB2B around Sama_2624

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,141,941	+		Sama_2623	0.48	+2.7
3,141,942	-		Sama_2623	0.48	-1.7
3,141,942	-		Sama_2623	0.48	-1.5
3,141,956	+		Sama_2623	0.49	+5.6
3,141,956	+		Sama_2623	0.49	+4.2
3,141,964	+		Sama_2623	0.49	-0.9
3,141,965	-		Sama_2623	0.49	+3.2
3,141,965	-		Sama_2623	0.49	-1.7
3,141,985	-		Sama_2623	0.50	-1.7
3,141,996	-		Sama_2623	0.51	+2.0
3,142,096	+		Sama_2623	0.56	+4.2
3,142,096	+		Sama_2623	0.56	+0.1
3,142,097	-		Sama_2623	0.56	+2.4
3,142,117	+		Sama_2623	0.57	+3.8
3,142,118	-		Sama_2623	0.57	+3.5
3,142,150	+		Sama_2623	0.59	+4.4
3,142,151	-		Sama_2623	0.59	-0.9
3,142,152	+		Sama_2623	0.59	+1.1
3,142,153	-		Sama_2623	0.59	-0.5
3,142,163	+		Sama_2623	0.60	-1.3
3,142,163	+		Sama_2623	0.60	+3.2
3,142,279	+		Sama_2623	0.66	+3.1
3,142,279	+		Sama_2623	0.66	+4.7
3,142,280	-		Sama_2623	0.66	+0.5
3,142,280	-		Sama_2623	0.66	-0.5
3,142,323	+		Sama_2623	0.68	+1.1
3,142,381	-		Sama_2623	0.71	+1.9
3,142,390	+		Sama_2623	0.72	+2.9
3,142,390	+		Sama_2623	0.72	-0.9
3,142,391	-		Sama_2623	0.72	-0.5
3,142,391	-		Sama_2623	0.72	+1.1
3,142,411	-		Sama_2623	0.73	+1.4
3,142,474	+		Sama_2623	0.76	+2.2
3,142,474	+		Sama_2623	0.76	+3.9
3,142,475	-		Sama_2623	0.76	+0.4
3,142,475	-		Sama_2623	0.76	+2.4
3,142,475	-		Sama_2623	0.76	+4.6
3,142,475	-		Sama_2623	0.76	+1.5
3,142,475	-		Sama_2623	0.76	+1.4
3,142,475	-		Sama_2623	0.76	+4.1
3,142,475	-		Sama_2623	0.76	+4.0
3,142,475	-		Sama_2623	0.76	-0.5
3,142,593	+		Sama_2623	0.83	+3.4
3,142,593	+		Sama_2623	0.83	+2.7
3,142,593	+		Sama_2623	0.83	+4.2
3,142,594	-		Sama_2623	0.83	+0.5
3,142,594	-		Sama_2623	0.83	+2.9
3,142,639	-		Sama_2623	0.85	-0.9
3,142,745	+				+2.8
3,142,745	+				+1.4
3,142,819	-				+2.0
3,142,819	-				+1.8
3,142,830	+				+1.6
3,142,830	+				-0.5
3,142,873	+				+2.3
3,142,918	+				+0.2
3,142,919	-				+1.7
3,142,959	-				+3.2
3,142,959	-				+0.3
3,142,959	-				-0.5
3,142,959	-				+1.1
3,142,977	-				-2.1
3,143,086	+		Sama_2624	0.21	+0.7
3,143,086	+		Sama_2624	0.21	+0.1
3,143,087	-		Sama_2624	0.21	+0.7
3,143,087	-		Sama_2624	0.21	-1.7
3,143,113	-		Sama_2624	0.24	+1.9
3,143,135	+		Sama_2624	0.27	-1.3
3,143,136	-		Sama_2624	0.27	-2.0
3,143,138	+		Sama_2624	0.27	-0.9
3,143,139	-		Sama_2624	0.27	-2.8
3,143,154	+		Sama_2624	0.29	+0.1
3,143,154	+		Sama_2624	0.29	-2.5
3,143,155	-		Sama_2624	0.29	-0.6
3,143,155	-		Sama_2624	0.29	+0.1
3,143,160	-		Sama_2624	0.30	-0.4
3,143,160	-		Sama_2624	0.30	+2.8
3,143,189	-		Sama_2624	0.33	-2.7
3,143,189	-		Sama_2624	0.33	+1.7
3,143,233	+		Sama_2624	0.39	+4.2
3,143,241	+		Sama_2624	0.40	-1.2
3,143,242	-		Sama_2624	0.40	-2.1
3,143,267	+		Sama_2624	0.43	+0.5
3,143,268	-		Sama_2624	0.43	+0.7
3,143,268	-		Sama_2624	0.43	+0.8
3,143,299	+		Sama_2624	0.47	+0.4
3,143,300	-		Sama_2624	0.47	-2.4
3,143,300	-		Sama_2624	0.47	-1.8
3,143,301	+		Sama_2624	0.47	+2.1
3,143,301	+		Sama_2624	0.47	-0.3
3,143,301	+		Sama_2624	0.47	+1.1
3,143,301	+		Sama_2624	0.47	-1.7
3,143,301	+		Sama_2624	0.47	+5.0
3,143,301	+		Sama_2624	0.47	-0.1
3,143,302	-		Sama_2624	0.47	-0.9
3,143,355	-		Sama_2624	0.54	-0.1
3,143,371	+		Sama_2624	0.56	-2.1
3,143,372	-		Sama_2624	0.56	-0.5
3,143,372	-		Sama_2624	0.56	+1.4
3,143,378	+		Sama_2624	0.56	-2.5
3,143,421	-		Sama_2624	0.62	+1.6
3,143,436	-		Sama_2624	0.64	+0.1
3,143,483	+		Sama_2624	0.69	+0.1
3,143,483	+		Sama_2624	0.69	-1.6
3,143,484	-		Sama_2624	0.69	-1.3
3,143,484	-		Sama_2624	0.69	-0.2
3,143,484	-		Sama_2624	0.69	+0.1
3,143,484	-		Sama_2624	0.69	-0.8
3,143,484	-		Sama_2624	0.69	+2.2
3,143,484	-		Sama_2624	0.69	+0.1
3,143,484	-		Sama_2624	0.69	+2.3
3,143,484	-		Sama_2624	0.69	-0.7
3,143,484	-		Sama_2624	0.69	-0.8
3,143,485	+		Sama_2624	0.70	+1.8
3,143,485	+		Sama_2624	0.70	+0.7
3,143,485	+		Sama_2624	0.70	+0.9
3,143,485	+		Sama_2624	0.70	+1.8
3,143,485	+		Sama_2624	0.70	+3.1
3,143,486	-		Sama_2624	0.70	+1.1
3,143,486	-		Sama_2624	0.70	+0.6
3,143,486	-		Sama_2624	0.70	+2.3
3,143,486	-		Sama_2624	0.70	+1.7
3,143,486	-		Sama_2624	0.70	+1.6
3,143,486	-		Sama_2624	0.70	-2.4
3,143,486	-		Sama_2624	0.70	-1.6
3,143,511	+		Sama_2624	0.73	-1.3
3,143,511	+		Sama_2624	0.73	+1.0
3,143,511	+		Sama_2624	0.73	-1.7
3,143,511	+		Sama_2624	0.73	+3.6
3,143,512	-		Sama_2624	0.73	+0.4
3,143,512	-		Sama_2624	0.73	-0.3
3,143,512	-		Sama_2624	0.73	-0.5
3,143,512	-		Sama_2624	0.73	-1.3
3,143,512	-		Sama_2624	0.73	-0.4
3,143,512	-		Sama_2624	0.73	+1.6
3,143,512	-		Sama_2624	0.73	-3.6
3,143,512	-		Sama_2624	0.73	-2.6
3,143,512	-		Sama_2624	0.73	-1.2
3,143,512	-		Sama_2624	0.73	+3.1
3,143,512	-		Sama_2624	0.73	-0.3
3,143,541	+		Sama_2624	0.76	-3.2
3,143,542	-		Sama_2624	0.77	-1.7
3,143,542	-		Sama_2624	0.77	+0.7
3,143,542	-		Sama_2624	0.77	+1.7
3,143,542	-		Sama_2624	0.77	+0.1
3,143,567	-		Sama_2624	0.80	+2.3
3,143,580	-		Sama_2624	0.81	-1.5
3,143,594	-		Sama_2624	0.83	-1.8
3,143,598	+		Sama_2624	0.83	-2.5
3,143,599	-		Sama_2624	0.84	+1.5
3,143,599	-		Sama_2624	0.84	-2.5
3,143,599	-		Sama_2624	0.84	+2.4
3,143,715	-				+1.8
3,143,715	-				+1.3
3,143,715	-				+1.8
3,143,715	-				+0.9
3,143,715	-				+1.1
3,143,715	-				-0.5
3,143,715	-				+1.5
3,143,759	-				+0.8
3,143,770	-				+2.4
3,143,829	+				-1.5
3,143,829	+				-0.5
3,143,829	+				-1.3
3,143,829	+				-0.9
3,143,830	-				-0.4
3,143,830	-				-0.3
3,143,830	-				+0.8
3,143,858	+				-0.8
3,143,963	+				-2.0
3,143,964	-				+0.1
3,143,971	+				-0.5
3,144,033	+		Sama_2625	0.15	+0.5
3,144,034	-		Sama_2625	0.15	+1.3
3,144,034	-		Sama_2625	0.15	-0.5
3,144,034	-		Sama_2625	0.15	+0.9
3,144,117	+		Sama_2625	0.22	-1.7
3,144,117	+		Sama_2625	0.22	+2.0
3,144,117	+		Sama_2625	0.22	+0.1
3,144,118	-		Sama_2625	0.22	+0.8
3,144,118	-		Sama_2625	0.22	-2.2
3,144,118	-		Sama_2625	0.22	-0.5
3,144,146	+		Sama_2625	0.24	-0.2
3,144,147	-		Sama_2625	0.24	+1.6
3,144,173	+		Sama_2625	0.27	-3.5
3,144,174	-		Sama_2625	0.27	-0.5
3,144,174	-		Sama_2625	0.27	+1.1
3,144,273	+		Sama_2625	0.35	-0.2
3,144,273	+		Sama_2625	0.35	+0.3
3,144,274	-		Sama_2625	0.35	-1.9
3,144,512	-		Sama_2625	0.56	-2.4
3,144,512	-		Sama_2625	0.56	-0.9
3,144,522	+		Sama_2625	0.57	+0.5
3,144,522	+		Sama_2625	0.57	-2.6
3,144,522	+		Sama_2625	0.57	-1.9
3,144,522	+		Sama_2625	0.57	+0.2
3,144,552	+		Sama_2625	0.59	+2.0
3,144,552	+		Sama_2625	0.59	+0.6
3,144,552	+		Sama_2625	0.59	-1.2
3,144,552	+		Sama_2625	0.59	+2.2
3,144,552	+		Sama_2625	0.59	-3.2
3,144,552	+		Sama_2625	0.59	+0.1
3,144,553	-		Sama_2625	0.59	-1.5
3,144,553	-		Sama_2625	0.59	+1.9
3,144,553	-		Sama_2625	0.59	-0.2
3,144,560	+		Sama_2625	0.60	-3.4
3,144,609	-		Sama_2625	0.64	+2.8
3,144,618	+		Sama_2625	0.65	-1.5
3,144,619	-		Sama_2625	0.65	+1.1
3,144,619	-		Sama_2625	0.65	+2.1
3,144,619	-		Sama_2625	0.65	-1.2
3,144,713	-		Sama_2625	0.73	-2.5
3,144,713	-		Sama_2625	0.73	+1.6
3,144,726	-		Sama_2625	0.74	+1.0