Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_06373

Experiment: Hexanoic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_06372 and H281DRAFT_06373 are separated by 252 nucleotidesH281DRAFT_06373 and H281DRAFT_06374 are separated by 129 nucleotides H281DRAFT_06372: H281DRAFT_06372 - TadE-like protein, at 44,366 to 45,418 _06372 H281DRAFT_06373: H281DRAFT_06373 - Protein of unknown function (DUF3005), at 45,671 to 46,252 _06373 H281DRAFT_06374: H281DRAFT_06374 - ATP-binding cassette, subfamily B, at 46,382 to 48,211 _06374 Position (kb) 45 46 47Strain fitness (log2 ratio) -2 -1 0 1at 44.764 kb on - strand, within H281DRAFT_06372at 45.003 kb on + strand, within H281DRAFT_06372at 45.015 kb on - strand, within H281DRAFT_06372at 45.317 kb on + strandat 45.417 kb on - strandat 45.510 kb on - strandat 45.740 kb on - strand, within H281DRAFT_06373at 45.805 kb on + strand, within H281DRAFT_06373at 46.092 kb on + strand, within H281DRAFT_06373at 46.169 kb on + strand, within H281DRAFT_06373at 46.169 kb on + strand, within H281DRAFT_06373at 46.169 kb on + strand, within H281DRAFT_06373at 46.169 kb on + strand, within H281DRAFT_06373at 46.251 kb on - strandat 46.493 kb on + strandat 46.494 kb on - strandat 46.847 kb on + strand, within H281DRAFT_06374at 46.848 kb on - strand, within H281DRAFT_06374at 47.050 kb on - strand, within H281DRAFT_06374

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Per-strain Table

Position Strand Gene LocusTag Fraction Hexanoic (C)
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44,764 - H281DRAFT_06372 0.38 -0.5
45,003 + H281DRAFT_06372 0.60 -0.3
45,015 - H281DRAFT_06372 0.62 -0.3
45,317 + +0.4
45,417 - -0.3
45,510 - +0.6
45,740 - H281DRAFT_06373 0.12 +1.3
45,805 + H281DRAFT_06373 0.23 +0.8
46,092 + H281DRAFT_06373 0.72 +0.8
46,169 + H281DRAFT_06373 0.86 +1.2
46,169 + H281DRAFT_06373 0.86 +0.5
46,169 + H281DRAFT_06373 0.86 +0.2
46,169 + H281DRAFT_06373 0.86 -0.1
46,251 - -0.4
46,493 + +0.3
46,494 - -2.3
46,847 + H281DRAFT_06374 0.25 -0.1
46,848 - H281DRAFT_06374 0.25 -0.5
47,050 - H281DRAFT_06374 0.37 +0.4

Or see this region's nucleotide sequence