Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05719 and H281DRAFT_05720 are separated by 108 nucleotides H281DRAFT_05720 and H281DRAFT_05721 are separated by 201 nucleotides H281DRAFT_05721 and H281DRAFT_05722 are separated by 1 nucleotides
H281DRAFT_05719: H281DRAFT_05719 - membrane-bound lytic murein transglycosylase A, at 137,787 to 138,941
_05719
H281DRAFT_05720: H281DRAFT_05720 - phenylacetate-CoA ligase, at 139,050 to 140,354
_05720
H281DRAFT_05721: H281DRAFT_05721 - acyl-CoA thioesterase, at 140,556 to 141,044
_05721
H281DRAFT_05722: H281DRAFT_05722 - 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) (from data) , at 141,046 to 141,837
_05722
Position (kb)
139
140
141 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 139.051 kb on + strand at 139.169 kb on - strand at 139.169 kb on - strand at 139.197 kb on + strand, within H281DRAFT_05720 at 139.275 kb on + strand, within H281DRAFT_05720 at 139.275 kb on + strand, within H281DRAFT_05720 at 139.276 kb on - strand, within H281DRAFT_05720 at 139.285 kb on + strand, within H281DRAFT_05720 at 139.286 kb on - strand, within H281DRAFT_05720 at 139.286 kb on - strand, within H281DRAFT_05720 at 139.286 kb on - strand, within H281DRAFT_05720 at 139.397 kb on + strand at 139.398 kb on - strand, within H281DRAFT_05720 at 139.559 kb on - strand, within H281DRAFT_05720 at 139.645 kb on + strand, within H281DRAFT_05720 at 139.645 kb on + strand, within H281DRAFT_05720 at 139.646 kb on - strand, within H281DRAFT_05720 at 139.646 kb on - strand, within H281DRAFT_05720 at 139.646 kb on - strand, within H281DRAFT_05720 at 139.646 kb on - strand, within H281DRAFT_05720 at 139.646 kb on - strand, within H281DRAFT_05720 at 139.728 kb on + strand, within H281DRAFT_05720 at 139.728 kb on + strand, within H281DRAFT_05720 at 139.728 kb on + strand, within H281DRAFT_05720 at 139.729 kb on - strand, within H281DRAFT_05720 at 139.729 kb on - strand, within H281DRAFT_05720 at 139.795 kb on + strand, within H281DRAFT_05720 at 139.795 kb on + strand, within H281DRAFT_05720 at 139.795 kb on + strand, within H281DRAFT_05720 at 139.796 kb on - strand, within H281DRAFT_05720 at 139.796 kb on - strand, within H281DRAFT_05720 at 139.796 kb on - strand, within H281DRAFT_05720 at 139.909 kb on + strand, within H281DRAFT_05720 at 139.910 kb on - strand, within H281DRAFT_05720 at 139.948 kb on + strand, within H281DRAFT_05720 at 139.949 kb on - strand, within H281DRAFT_05720 at 140.041 kb on + strand, within H281DRAFT_05720 at 140.042 kb on - strand, within H281DRAFT_05720 at 140.131 kb on + strand at 140.236 kb on + strand at 140.237 kb on - strand at 140.255 kb on - strand at 140.301 kb on + strand at 140.301 kb on + strand at 140.302 kb on - strand at 140.302 kb on - strand at 140.391 kb on + strand at 140.557 kb on + strand at 140.558 kb on - strand at 140.558 kb on - strand at 140.648 kb on + strand, within H281DRAFT_05721 at 140.663 kb on + strand, within H281DRAFT_05721 at 140.663 kb on + strand, within H281DRAFT_05721 at 140.664 kb on - strand, within H281DRAFT_05721 at 140.664 kb on - strand, within H281DRAFT_05721 at 140.664 kb on - strand, within H281DRAFT_05721 at 140.664 kb on - strand, within H281DRAFT_05721 at 140.667 kb on + strand, within H281DRAFT_05721 at 140.668 kb on - strand, within H281DRAFT_05721 at 140.676 kb on - strand, within H281DRAFT_05721 at 140.680 kb on + strand, within H281DRAFT_05721 at 140.680 kb on + strand, within H281DRAFT_05721 at 140.680 kb on + strand, within H281DRAFT_05721 at 140.681 kb on - strand, within H281DRAFT_05721 at 140.681 kb on - strand, within H281DRAFT_05721 at 140.797 kb on + strand, within H281DRAFT_05721 at 140.798 kb on - strand, within H281DRAFT_05721 at 140.798 kb on - strand, within H281DRAFT_05721 at 140.798 kb on - strand, within H281DRAFT_05721 at 140.837 kb on + strand, within H281DRAFT_05721 at 140.837 kb on + strand, within H281DRAFT_05721 at 140.838 kb on - strand, within H281DRAFT_05721 at 140.841 kb on + strand, within H281DRAFT_05721 at 140.912 kb on - strand, within H281DRAFT_05721 at 140.972 kb on - strand, within H281DRAFT_05721 at 140.972 kb on - strand, within H281DRAFT_05721 at 141.025 kb on + strand at 141.025 kb on + strand at 141.044 kb on + strand at 141.045 kb on - strand at 141.045 kb on - strand at 141.045 kb on - strand at 141.104 kb on + strand at 141.104 kb on + strand at 141.104 kb on + strand at 141.199 kb on - strand, within H281DRAFT_05722 at 141.199 kb on - strand, within H281DRAFT_05722 at 141.199 kb on - strand, within H281DRAFT_05722 at 141.295 kb on - strand, within H281DRAFT_05722 at 141.295 kb on - strand, within H281DRAFT_05722 at 141.295 kb on - strand, within H281DRAFT_05722 at 141.295 kb on - strand, within H281DRAFT_05722 at 141.295 kb on - strand, within H281DRAFT_05722 at 141.295 kb on - strand, within H281DRAFT_05722 at 141.295 kb on - strand, within H281DRAFT_05722 at 141.353 kb on - strand, within H281DRAFT_05722
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 139,051 + +1.0 139,169 - -1.6 139,169 - -0.8 139,197 + H281DRAFT_05720 0.11 +1.7 139,275 + H281DRAFT_05720 0.17 -0.3 139,275 + H281DRAFT_05720 0.17 +1.1 139,276 - H281DRAFT_05720 0.17 +0.5 139,285 + H281DRAFT_05720 0.18 -0.2 139,286 - H281DRAFT_05720 0.18 -0.6 139,286 - H281DRAFT_05720 0.18 +0.1 139,286 - H281DRAFT_05720 0.18 +0.7 139,397 + -1.1 139,398 - H281DRAFT_05720 0.27 -1.5 139,559 - H281DRAFT_05720 0.39 +1.2 139,645 + H281DRAFT_05720 0.46 +0.3 139,645 + H281DRAFT_05720 0.46 +0.4 139,646 - H281DRAFT_05720 0.46 -0.2 139,646 - H281DRAFT_05720 0.46 -0.1 139,646 - H281DRAFT_05720 0.46 +2.2 139,646 - H281DRAFT_05720 0.46 +0.7 139,646 - H281DRAFT_05720 0.46 -0.6 139,728 + H281DRAFT_05720 0.52 -0.2 139,728 + H281DRAFT_05720 0.52 -0.3 139,728 + H281DRAFT_05720 0.52 -0.4 139,729 - H281DRAFT_05720 0.52 -2.1 139,729 - H281DRAFT_05720 0.52 -0.1 139,795 + H281DRAFT_05720 0.57 -0.8 139,795 + H281DRAFT_05720 0.57 -2.6 139,795 + H281DRAFT_05720 0.57 -0.1 139,796 - H281DRAFT_05720 0.57 +0.4 139,796 - H281DRAFT_05720 0.57 -0.1 139,796 - H281DRAFT_05720 0.57 -0.4 139,909 + H281DRAFT_05720 0.66 +0.5 139,910 - H281DRAFT_05720 0.66 +2.4 139,948 + H281DRAFT_05720 0.69 +0.3 139,949 - H281DRAFT_05720 0.69 -0.1 140,041 + H281DRAFT_05720 0.76 +0.8 140,042 - H281DRAFT_05720 0.76 +0.9 140,131 + +0.2 140,236 + -0.8 140,237 - +2.3 140,255 - +0.3 140,301 + +0.8 140,301 + +0.3 140,302 - -0.8 140,302 - +0.3 140,391 + +0.2 140,557 + +0.4 140,558 - -0.6 140,558 - -0.6 140,648 + H281DRAFT_05721 0.19 +0.9 140,663 + H281DRAFT_05721 0.22 -0.1 140,663 + H281DRAFT_05721 0.22 -0.4 140,664 - H281DRAFT_05721 0.22 +0.1 140,664 - H281DRAFT_05721 0.22 +1.0 140,664 - H281DRAFT_05721 0.22 -0.2 140,664 - H281DRAFT_05721 0.22 -0.2 140,667 + H281DRAFT_05721 0.23 +0.1 140,668 - H281DRAFT_05721 0.23 -0.4 140,676 - H281DRAFT_05721 0.25 +1.3 140,680 + H281DRAFT_05721 0.25 -0.7 140,680 + H281DRAFT_05721 0.25 -0.6 140,680 + H281DRAFT_05721 0.25 -0.9 140,681 - H281DRAFT_05721 0.26 +0.1 140,681 - H281DRAFT_05721 0.26 +0.4 140,797 + H281DRAFT_05721 0.49 +0.2 140,798 - H281DRAFT_05721 0.49 +0.1 140,798 - H281DRAFT_05721 0.49 -0.3 140,798 - H281DRAFT_05721 0.49 -2.3 140,837 + H281DRAFT_05721 0.57 +0.6 140,837 + H281DRAFT_05721 0.57 -0.1 140,838 - H281DRAFT_05721 0.58 -0.2 140,841 + H281DRAFT_05721 0.58 +0.5 140,912 - H281DRAFT_05721 0.73 -2.3 140,972 - H281DRAFT_05721 0.85 -0.5 140,972 - H281DRAFT_05721 0.85 +2.5 141,025 + -1.7 141,025 + +0.6 141,044 + +1.2 141,045 - +0.1 141,045 - +0.1 141,045 - +0.8 141,104 + +0.7 141,104 + -0.3 141,104 + -0.9 141,199 - H281DRAFT_05722 0.19 +0.8 141,199 - H281DRAFT_05722 0.19 +1.0 141,199 - H281DRAFT_05722 0.19 +0.3 141,295 - H281DRAFT_05722 0.31 +0.8 141,295 - H281DRAFT_05722 0.31 -1.3 141,295 - H281DRAFT_05722 0.31 +0.7 141,295 - H281DRAFT_05722 0.31 +1.5 141,295 - H281DRAFT_05722 0.31 +0.2 141,295 - H281DRAFT_05722 0.31 -0.0 141,295 - H281DRAFT_05722 0.31 +0.2 141,353 - H281DRAFT_05722 0.39 -1.4
Or see this region's nucleotide sequence