Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05216 and H281DRAFT_05217 are separated by 5 nucleotides H281DRAFT_05217 and H281DRAFT_05218 are separated by 190 nucleotides H281DRAFT_05218 and H281DRAFT_05219 are separated by 199 nucleotides
H281DRAFT_05216: H281DRAFT_05216 - Protein of unknown function (DUF3022), at 179,035 to 179,400
_05216
H281DRAFT_05217: H281DRAFT_05217 - PGDYG protein, at 179,406 to 179,849
_05217
H281DRAFT_05218: H281DRAFT_05218 - LTXXQ motif family protein, at 180,040 to 180,558
_05218
H281DRAFT_05219: H281DRAFT_05219 - transcriptional regulator, LysR family, at 180,758 to 181,642
_05219
Position (kb) 180
181 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 179.092 kb on - strand, within H281DRAFT_05216 at 179.125 kb on - strand, within H281DRAFT_05216 at 179.302 kb on + strand, within H281DRAFT_05216 at 179.339 kb on - strand, within H281DRAFT_05216 at 179.423 kb on - strand at 179.612 kb on + strand, within H281DRAFT_05217 at 179.612 kb on + strand, within H281DRAFT_05217 at 179.613 kb on - strand, within H281DRAFT_05217 at 179.641 kb on + strand, within H281DRAFT_05217 at 179.642 kb on - strand, within H281DRAFT_05217 at 179.720 kb on - strand, within H281DRAFT_05217 at 180.041 kb on + strand at 180.042 kb on - strand at 180.094 kb on - strand, within H281DRAFT_05218 at 180.146 kb on - strand, within H281DRAFT_05218 at 180.185 kb on + strand, within H281DRAFT_05218 at 180.648 kb on + strand at 180.649 kb on - strand at 180.684 kb on + strand at 180.684 kb on + strand at 180.684 kb on + strand at 180.687 kb on + strand at 180.688 kb on - strand at 180.688 kb on - strand at 180.695 kb on + strand at 180.701 kb on + strand at 180.701 kb on + strand at 180.702 kb on - strand at 180.730 kb on + strand at 180.731 kb on - strand at 180.752 kb on + strand at 180.953 kb on + strand, within H281DRAFT_05219 at 180.953 kb on + strand, within H281DRAFT_05219 at 181.098 kb on - strand, within H281DRAFT_05219 at 181.268 kb on + strand, within H281DRAFT_05219 at 181.295 kb on - strand, within H281DRAFT_05219
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 179,092 - H281DRAFT_05216 0.16 +0.9 179,125 - H281DRAFT_05216 0.25 -3.2 179,302 + H281DRAFT_05216 0.73 -0.1 179,339 - H281DRAFT_05216 0.83 +1.5 179,423 - +0.2 179,612 + H281DRAFT_05217 0.46 -0.3 179,612 + H281DRAFT_05217 0.46 +0.5 179,613 - H281DRAFT_05217 0.47 +0.8 179,641 + H281DRAFT_05217 0.53 -0.6 179,642 - H281DRAFT_05217 0.53 -1.4 179,720 - H281DRAFT_05217 0.71 +0.2 180,041 + +0.6 180,042 - +1.4 180,094 - H281DRAFT_05218 0.10 +0.6 180,146 - H281DRAFT_05218 0.20 +0.6 180,185 + H281DRAFT_05218 0.28 +0.9 180,648 + +0.3 180,649 - -0.1 180,684 + +0.1 180,684 + -0.1 180,684 + +0.3 180,687 + -3.1 180,688 - +0.1 180,688 - +1.5 180,695 + -0.0 180,701 + -0.5 180,701 + -0.6 180,702 - -0.5 180,730 + +0.6 180,731 - +0.5 180,752 + +0.4 180,953 + H281DRAFT_05219 0.22 -0.2 180,953 + H281DRAFT_05219 0.22 -0.1 181,098 - H281DRAFT_05219 0.38 +0.3 181,268 + H281DRAFT_05219 0.58 +0.8 181,295 - H281DRAFT_05219 0.61 +0.3
Or see this region's nucleotide sequence