Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04848 and H281DRAFT_04849 overlap by 4 nucleotides H281DRAFT_04849 and H281DRAFT_04850 are separated by 14 nucleotides
H281DRAFT_04848: H281DRAFT_04848 - hypothetical protein, at 290,597 to 291,442
_04848
H281DRAFT_04849: H281DRAFT_04849 - UDP-glucose 4-epimerase, at 291,439 to 292,395
_04849
H281DRAFT_04850: H281DRAFT_04850 - UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase, at 292,410 to 293,435
_04850
Position (kb) 291
292
293 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 290.462 kb on + strand at 290.463 kb on - strand at 290.463 kb on - strand at 290.463 kb on - strand at 290.476 kb on + strand at 290.476 kb on + strand at 290.476 kb on + strand at 290.476 kb on + strand at 290.605 kb on + strand at 290.605 kb on + strand at 290.605 kb on + strand at 290.606 kb on - strand at 290.606 kb on - strand at 290.629 kb on + strand at 291.039 kb on - strand, within H281DRAFT_04848 at 291.135 kb on - strand, within H281DRAFT_04848 at 291.151 kb on - strand at 291.151 kb on - strand, within H281DRAFT_04848 at 291.151 kb on - strand, within H281DRAFT_04848 at 291.933 kb on - strand, within H281DRAFT_04849 at 291.956 kb on - strand, within H281DRAFT_04849 at 292.058 kb on - strand, within H281DRAFT_04849 at 293.148 kb on - strand, within H281DRAFT_04850 at 293.209 kb on - strand, within H281DRAFT_04850 at 293.209 kb on - strand, within H281DRAFT_04850 at 293.209 kb on - strand, within H281DRAFT_04850 at 293.263 kb on - strand, within H281DRAFT_04850
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 290,462 + -1.8 290,463 - +0.8 290,463 - -0.4 290,463 - -0.3 290,476 + -0.3 290,476 + +0.7 290,476 + +0.4 290,476 + +0.8 290,605 + -3.6 290,605 + +0.6 290,605 + -0.0 290,606 - -2.3 290,606 - -0.8 290,629 + -0.0 291,039 - H281DRAFT_04848 0.52 -2.5 291,135 - H281DRAFT_04848 0.64 -1.8 291,151 - +0.2 291,151 - H281DRAFT_04848 0.65 -1.7 291,151 - H281DRAFT_04848 0.65 -1.3 291,933 - H281DRAFT_04849 0.52 -1.2 291,956 - H281DRAFT_04849 0.54 -2.3 292,058 - H281DRAFT_04849 0.65 -2.1 293,148 - H281DRAFT_04850 0.72 +1.0 293,209 - H281DRAFT_04850 0.78 -2.3 293,209 - H281DRAFT_04850 0.78 -2.1 293,209 - H281DRAFT_04850 0.78 -0.8 293,263 - H281DRAFT_04850 0.83 -1.2
Or see this region's nucleotide sequence