Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04592 and H281DRAFT_04593 are separated by 20 nucleotides H281DRAFT_04593 and H281DRAFT_04594 are separated by 10 nucleotides H281DRAFT_04594 and H281DRAFT_04595 overlap by 4 nucleotides
H281DRAFT_04592: H281DRAFT_04592 - Predicted kinase, aminoglycoside phosphotransferase (APT) family, at 323,940 to 325,046
_04592
H281DRAFT_04593: H281DRAFT_04593 - probable phosphoglycerate mutase, at 325,067 to 325,819
_04593
H281DRAFT_04594: H281DRAFT_04594 - putative oxepin-CoA hydrolase (EC 3.3.2.12) <small>(from data)</small>, at 325,830 to 326,618
_04594
H281DRAFT_04595: H281DRAFT_04595 - 3-hydroxyacyl-CoA dehydrogenase, at 326,615 to 328,180
_04595
Position (kb) 325
326
327 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 325.000 kb on + strand at 325.001 kb on - strand at 325.072 kb on + strand at 325.073 kb on - strand at 325.080 kb on + strand at 325.080 kb on + strand at 325.117 kb on + strand at 325.156 kb on - strand, within H281DRAFT_04593 at 325.459 kb on + strand, within H281DRAFT_04593 at 325.482 kb on - strand, within H281DRAFT_04593 at 325.482 kb on - strand, within H281DRAFT_04593 at 325.482 kb on - strand, within H281DRAFT_04593 at 325.719 kb on + strand, within H281DRAFT_04593 at 325.719 kb on + strand, within H281DRAFT_04593 at 325.719 kb on + strand, within H281DRAFT_04593 at 325.743 kb on - strand, within H281DRAFT_04593 at 325.762 kb on + strand at 325.766 kb on + strand at 325.773 kb on + strand at 325.773 kb on + strand at 325.773 kb on + strand at 325.774 kb on - strand at 325.835 kb on + strand at 325.837 kb on + strand at 325.913 kb on + strand, within H281DRAFT_04594 at 326.001 kb on + strand, within H281DRAFT_04594 at 326.515 kb on + strand, within H281DRAFT_04594 at 326.516 kb on - strand, within H281DRAFT_04594 at 326.516 kb on - strand, within H281DRAFT_04594 at 326.565 kb on + strand at 326.746 kb on + strand at 326.902 kb on + strand, within H281DRAFT_04595 at 327.032 kb on - strand, within H281DRAFT_04595 at 327.225 kb on + strand, within H281DRAFT_04595 at 327.226 kb on - strand, within H281DRAFT_04595 at 327.319 kb on - strand, within H281DRAFT_04595 at 327.324 kb on + strand, within H281DRAFT_04595 at 327.382 kb on + strand, within H281DRAFT_04595 at 327.383 kb on - strand, within H281DRAFT_04595 at 327.395 kb on - strand, within H281DRAFT_04595 at 327.411 kb on + strand, within H281DRAFT_04595 at 327.423 kb on + strand, within H281DRAFT_04595 at 327.424 kb on - strand, within H281DRAFT_04595 at 327.449 kb on + strand, within H281DRAFT_04595
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 325,000 + +0.9 325,001 - +0.2 325,072 + -0.6 325,073 - -0.3 325,080 + +0.5 325,080 + -0.9 325,117 + +0.2 325,156 - H281DRAFT_04593 0.12 +0.5 325,459 + H281DRAFT_04593 0.52 +0.2 325,482 - H281DRAFT_04593 0.55 -0.4 325,482 - H281DRAFT_04593 0.55 +1.3 325,482 - H281DRAFT_04593 0.55 +0.2 325,719 + H281DRAFT_04593 0.87 +0.1 325,719 + H281DRAFT_04593 0.87 +0.2 325,719 + H281DRAFT_04593 0.87 -1.0 325,743 - H281DRAFT_04593 0.90 -0.2 325,762 + -0.4 325,766 + +0.2 325,773 + +0.6 325,773 + -0.1 325,773 + -1.5 325,774 - +0.3 325,835 + -3.9 325,837 + +0.1 325,913 + H281DRAFT_04594 0.11 +0.7 326,001 + H281DRAFT_04594 0.22 +1.1 326,515 + H281DRAFT_04594 0.87 +1.4 326,516 - H281DRAFT_04594 0.87 +1.2 326,516 - H281DRAFT_04594 0.87 -2.5 326,565 + +0.2 326,746 + +0.5 326,902 + H281DRAFT_04595 0.18 -1.0 327,032 - H281DRAFT_04595 0.27 +1.0 327,225 + H281DRAFT_04595 0.39 +0.6 327,226 - H281DRAFT_04595 0.39 +0.3 327,319 - H281DRAFT_04595 0.45 -0.4 327,324 + H281DRAFT_04595 0.45 -3.3 327,382 + H281DRAFT_04595 0.49 -0.7 327,383 - H281DRAFT_04595 0.49 -0.8 327,395 - H281DRAFT_04595 0.50 -0.5 327,411 + H281DRAFT_04595 0.51 -0.4 327,423 + H281DRAFT_04595 0.52 -0.6 327,424 - H281DRAFT_04595 0.52 -0.0 327,449 + H281DRAFT_04595 0.53 -1.8
Or see this region's nucleotide sequence