Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04377 and H281DRAFT_04378 are separated by 207 nucleotides H281DRAFT_04378 and H281DRAFT_04379 are separated by 35 nucleotides H281DRAFT_04379 and H281DRAFT_04380 are separated by 21 nucleotides H281DRAFT_04380 and H281DRAFT_04381 are separated by 98 nucleotides H281DRAFT_04381 and H281DRAFT_04382 are separated by 159 nucleotides H281DRAFT_04382 and H281DRAFT_04383 are separated by 132 nucleotides
H281DRAFT_04377: H281DRAFT_04377 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 94,851 to 95,444
_04377
H281DRAFT_04378: H281DRAFT_04378 - tRNA_Gly_GCC, at 95,652 to 95,727
_04378
H281DRAFT_04379: H281DRAFT_04379 - hypothetical protein, at 95,763 to 95,774
_04379
H281DRAFT_04380: H281DRAFT_04380 - tRNA_Gly_GCC, at 95,796 to 95,871
_04380
H281DRAFT_04381: H281DRAFT_04381 - tRNA_Cys_GCA, at 95,970 to 96,043
_04381
H281DRAFT_04382: H281DRAFT_04382 - hypothetical protein, at 96,203 to 96,961
_04382
H281DRAFT_04383: H281DRAFT_04383 - diguanylate cyclase with GAF sensor, at 97,094 to 98,074
_04383
Position (kb) 96
97 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 95.507 kb on + strand at 95.659 kb on + strand at 95.659 kb on + strand at 95.759 kb on + strand at 95.759 kb on + strand at 95.872 kb on + strand at 95.872 kb on + strand at 95.872 kb on + strand at 95.872 kb on + strand at 95.951 kb on + strand at 95.951 kb on + strand at 96.046 kb on - strand at 96.046 kb on - strand at 96.206 kb on + strand at 96.206 kb on + strand at 96.207 kb on - strand at 96.207 kb on - strand at 96.207 kb on - strand at 96.210 kb on + strand at 96.211 kb on - strand at 96.211 kb on - strand at 96.581 kb on + strand, within H281DRAFT_04382 at 96.581 kb on + strand, within H281DRAFT_04382 at 96.582 kb on - strand at 96.582 kb on - strand, within H281DRAFT_04382 at 96.582 kb on - strand, within H281DRAFT_04382 at 96.587 kb on + strand, within H281DRAFT_04382 at 96.837 kb on + strand, within H281DRAFT_04382 at 96.895 kb on - strand at 96.959 kb on + strand at 96.972 kb on - strand at 97.056 kb on + strand at 97.057 kb on - strand at 97.057 kb on - strand at 97.165 kb on + strand at 97.166 kb on - strand at 97.241 kb on - strand, within H281DRAFT_04383 at 97.350 kb on + strand, within H281DRAFT_04383 at 97.351 kb on - strand, within H281DRAFT_04383 at 97.430 kb on + strand, within H281DRAFT_04383 at 97.430 kb on + strand, within H281DRAFT_04383 at 97.431 kb on - strand, within H281DRAFT_04383 at 97.776 kb on + strand, within H281DRAFT_04383 at 97.776 kb on + strand, within H281DRAFT_04383 at 97.777 kb on - strand, within H281DRAFT_04383 at 97.891 kb on + strand, within H281DRAFT_04383 at 97.892 kb on - strand, within H281DRAFT_04383 at 97.892 kb on - strand, within H281DRAFT_04383 at 97.948 kb on + strand, within H281DRAFT_04383
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 95,507 + -0.7 95,659 + -3.7 95,659 + -0.4 95,759 + -2.3 95,759 + +0.7 95,872 + +2.0 95,872 + -2.4 95,872 + -1.1 95,872 + -1.7 95,951 + -1.4 95,951 + -2.3 96,046 - -0.9 96,046 - +0.2 96,206 + -0.3 96,206 + +0.2 96,207 - +0.0 96,207 - -0.9 96,207 - -0.0 96,210 + -0.1 96,211 - -0.1 96,211 - -1.3 96,581 + H281DRAFT_04382 0.50 +0.9 96,581 + H281DRAFT_04382 0.50 +0.3 96,582 - -0.7 96,582 - H281DRAFT_04382 0.50 +1.0 96,582 - H281DRAFT_04382 0.50 +0.2 96,587 + H281DRAFT_04382 0.51 +1.9 96,837 + H281DRAFT_04382 0.84 +0.2 96,895 - +0.4 96,959 + +0.0 96,972 - +0.1 97,056 + -0.0 97,057 - +1.7 97,057 - -1.3 97,165 + +0.4 97,166 - +1.9 97,241 - H281DRAFT_04383 0.15 -0.4 97,350 + H281DRAFT_04383 0.26 -1.6 97,351 - H281DRAFT_04383 0.26 +0.2 97,430 + H281DRAFT_04383 0.34 -0.1 97,430 + H281DRAFT_04383 0.34 +0.0 97,431 - H281DRAFT_04383 0.34 +0.5 97,776 + H281DRAFT_04383 0.70 -0.1 97,776 + H281DRAFT_04383 0.70 -0.3 97,777 - H281DRAFT_04383 0.70 +1.0 97,891 + H281DRAFT_04383 0.81 +2.1 97,892 - H281DRAFT_04383 0.81 +0.8 97,892 - H281DRAFT_04383 0.81 -0.2 97,948 + H281DRAFT_04383 0.87 +0.3
Or see this region's nucleotide sequence