Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04265

Experiment: Hexanoic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04265 and H281DRAFT_04266 are separated by 187 nucleotides H281DRAFT_04265: H281DRAFT_04265 - dihydroorotase, at 383,053 to 384,123 _04265 H281DRAFT_04266: H281DRAFT_04266 - glutamine amidotransferase, at 384,311 to 385,246 _04266 Position (kb) 383 384 385Strain fitness (log2 ratio) -3 -2 -1 0 1at 382.148 kb on - strandat 382.176 kb on - strandat 382.176 kb on - strandat 382.191 kb on + strandat 382.192 kb on - strandat 382.347 kb on + strandat 382.358 kb on + strandat 382.636 kb on + strandat 382.636 kb on + strandat 382.637 kb on - strandat 382.746 kb on + strandat 382.763 kb on + strandat 382.763 kb on + strandat 382.860 kb on + strandat 382.861 kb on - strandat 383.043 kb on + strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.044 kb on - strandat 383.186 kb on + strand, within H281DRAFT_04265at 384.276 kb on + strandat 384.276 kb on + strandat 384.301 kb on + strandat 384.302 kb on - strandat 384.674 kb on + strand, within H281DRAFT_04266at 384.675 kb on - strand, within H281DRAFT_04266at 384.800 kb on - strandat 384.887 kb on + strand, within H281DRAFT_04266at 384.959 kb on + strand, within H281DRAFT_04266at 385.071 kb on + strand, within H281DRAFT_04266at 385.071 kb on + strand, within H281DRAFT_04266

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Per-strain Table

Position Strand Gene LocusTag Fraction Hexanoic (C)
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382,148 - -1.4
382,176 - +0.4
382,176 - -1.4
382,191 + -0.1
382,192 - +0.1
382,347 + -3.4
382,358 + -1.1
382,636 + +0.1
382,636 + +0.0
382,637 - -1.2
382,746 + +0.2
382,763 + -0.2
382,763 + -1.7
382,860 + +0.3
382,861 - -2.0
383,043 + +0.4
383,044 - +0.5
383,044 - +0.2
383,044 - +0.4
383,044 - +1.4
383,044 - -1.4
383,044 - -0.3
383,186 + H281DRAFT_04265 0.12 -1.9
384,276 + -0.2
384,276 + -1.1
384,301 + -1.3
384,302 - +0.4
384,674 + H281DRAFT_04266 0.39 +0.1
384,675 - H281DRAFT_04266 0.39 +0.2
384,800 - -1.2
384,887 + H281DRAFT_04266 0.62 +0.0
384,959 + H281DRAFT_04266 0.69 +0.5
385,071 + H281DRAFT_04266 0.81 +0.5
385,071 + H281DRAFT_04266 0.81 +0.5

Or see this region's nucleotide sequence