Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04088 and H281DRAFT_04089 are separated by 214 nucleotides H281DRAFT_04089 and H281DRAFT_04090 are separated by 17 nucleotides H281DRAFT_04090 and H281DRAFT_04091 are separated by 364 nucleotides
H281DRAFT_04088: H281DRAFT_04088 - translation elongation factor 2 (EF-2/EF-G), at 193,069 to 195,174
_04088
H281DRAFT_04089: H281DRAFT_04089 - Uncharacterized protein, RmlC-like cupin domain, at 195,389 to 195,913
_04089
H281DRAFT_04090: H281DRAFT_04090 - high-affinity nickel-transport protein, at 195,931 to 196,959
_04090
H281DRAFT_04091: H281DRAFT_04091 - peptide/nickel transport system substrate-binding protein, at 197,324 to 198,997
_04091
Position (kb) 195
196
197 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 195.118 kb on + strand at 195.172 kb on + strand at 195.320 kb on - strand at 195.417 kb on - strand at 195.653 kb on + strand, within H281DRAFT_04089 at 195.653 kb on + strand, within H281DRAFT_04089 at 195.654 kb on - strand, within H281DRAFT_04089 at 195.654 kb on - strand, within H281DRAFT_04089 at 195.654 kb on - strand, within H281DRAFT_04089 at 195.746 kb on + strand, within H281DRAFT_04089 at 195.852 kb on + strand, within H281DRAFT_04089 at 195.872 kb on + strand at 195.872 kb on + strand at 195.973 kb on + strand at 195.973 kb on + strand at 195.974 kb on - strand at 196.069 kb on + strand, within H281DRAFT_04090 at 196.069 kb on + strand, within H281DRAFT_04090 at 196.497 kb on + strand, within H281DRAFT_04090 at 196.497 kb on + strand, within H281DRAFT_04090 at 196.497 kb on + strand, within H281DRAFT_04090 at 196.498 kb on - strand, within H281DRAFT_04090 at 196.498 kb on - strand, within H281DRAFT_04090 at 196.498 kb on - strand, within H281DRAFT_04090 at 196.600 kb on + strand, within H281DRAFT_04090 at 196.684 kb on + strand, within H281DRAFT_04090 at 196.720 kb on + strand, within H281DRAFT_04090 at 196.720 kb on + strand, within H281DRAFT_04090 at 196.723 kb on + strand at 196.738 kb on - strand, within H281DRAFT_04090 at 196.738 kb on - strand, within H281DRAFT_04090 at 196.766 kb on + strand, within H281DRAFT_04090 at 196.779 kb on - strand, within H281DRAFT_04090 at 196.779 kb on - strand, within H281DRAFT_04090 at 197.009 kb on - strand at 197.190 kb on - strand at 197.204 kb on + strand at 197.207 kb on + strand at 197.945 kb on + strand, within H281DRAFT_04091 at 197.945 kb on + strand, within H281DRAFT_04091
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 195,118 + +1.4 195,172 + +0.1 195,320 - +0.7 195,417 - -0.2 195,653 + H281DRAFT_04089 0.50 -0.2 195,653 + H281DRAFT_04089 0.50 +0.0 195,654 - H281DRAFT_04089 0.50 -0.4 195,654 - H281DRAFT_04089 0.50 +0.4 195,654 - H281DRAFT_04089 0.50 +0.1 195,746 + H281DRAFT_04089 0.68 +0.3 195,852 + H281DRAFT_04089 0.88 +0.7 195,872 + -1.9 195,872 + -0.5 195,973 + -0.4 195,973 + -0.4 195,974 - -1.0 196,069 + H281DRAFT_04090 0.13 -0.9 196,069 + H281DRAFT_04090 0.13 -2.9 196,497 + H281DRAFT_04090 0.55 +0.7 196,497 + H281DRAFT_04090 0.55 +1.6 196,497 + H281DRAFT_04090 0.55 +0.7 196,498 - H281DRAFT_04090 0.55 -0.6 196,498 - H281DRAFT_04090 0.55 -0.1 196,498 - H281DRAFT_04090 0.55 +0.7 196,600 + H281DRAFT_04090 0.65 -0.3 196,684 + H281DRAFT_04090 0.73 -0.0 196,720 + H281DRAFT_04090 0.77 -0.2 196,720 + H281DRAFT_04090 0.77 -3.3 196,723 + +0.6 196,738 - H281DRAFT_04090 0.78 -1.0 196,738 - H281DRAFT_04090 0.78 +0.3 196,766 + H281DRAFT_04090 0.81 +0.3 196,779 - H281DRAFT_04090 0.82 -0.0 196,779 - H281DRAFT_04090 0.82 +0.9 197,009 - -0.6 197,190 - +0.9 197,204 + +0.2 197,207 + -0.2 197,945 + H281DRAFT_04091 0.37 -0.1 197,945 + H281DRAFT_04091 0.37 -0.3
Or see this region's nucleotide sequence