Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03992 and H281DRAFT_03993 are separated by 93 nucleotides H281DRAFT_03993 and H281DRAFT_03994 are separated by 115 nucleotides H281DRAFT_03994 and H281DRAFT_03995 are separated by 410 nucleotides H281DRAFT_03995 and H281DRAFT_03996 are separated by 278 nucleotides H281DRAFT_03996 and H281DRAFT_03997 are separated by 106 nucleotides
H281DRAFT_03992: H281DRAFT_03992 - tRNA_Thr_CGT, at 99,136 to 99,211
_03992
H281DRAFT_03993: H281DRAFT_03993 - hypothetical protein, at 99,305 to 99,523
_03993
H281DRAFT_03994: H281DRAFT_03994 - hypothetical protein, at 99,639 to 99,791
_03994
H281DRAFT_03995: H281DRAFT_03995 - hypothetical protein, at 100,202 to 100,351
_03995
H281DRAFT_03996: H281DRAFT_03996 - chorismate mutase (EC 5.4.99.5), at 100,630 to 101,226
_03996
H281DRAFT_03997: H281DRAFT_03997 - DNA polymerase-3 subunit epsilon, at 101,333 to 102,484
_03997
Position (kb) 100
101 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 99.290 kb on + strand at 99.290 kb on + strand at 99.290 kb on + strand at 99.291 kb on - strand at 99.291 kb on - strand at 99.306 kb on + strand at 99.326 kb on - strand at 99.508 kb on - strand at 99.508 kb on - strand at 99.624 kb on + strand at 99.624 kb on + strand at 99.625 kb on - strand at 99.747 kb on - strand, within H281DRAFT_03994 at 99.796 kb on + strand at 99.796 kb on + strand at 99.797 kb on - strand at 99.805 kb on + strand at 99.812 kb on + strand at 99.812 kb on + strand at 99.835 kb on + strand at 99.938 kb on + strand at 99.950 kb on - strand at 99.951 kb on + strand at 100.071 kb on + strand at 100.187 kb on + strand at 100.188 kb on - strand at 100.246 kb on + strand, within H281DRAFT_03995 at 100.246 kb on + strand, within H281DRAFT_03995 at 100.246 kb on + strand, within H281DRAFT_03995 at 100.247 kb on - strand, within H281DRAFT_03995 at 100.349 kb on + strand at 100.349 kb on + strand at 100.390 kb on - strand at 100.390 kb on - strand at 100.583 kb on + strand at 100.583 kb on + strand at 100.584 kb on - strand at 100.803 kb on + strand, within H281DRAFT_03996 at 101.136 kb on + strand, within H281DRAFT_03996 at 101.137 kb on - strand, within H281DRAFT_03996 at 101.192 kb on + strand at 101.192 kb on + strand at 101.192 kb on + strand at 101.192 kb on + strand at 101.192 kb on + strand at 101.193 kb on - strand at 101.193 kb on - strand at 101.193 kb on - strand at 101.193 kb on - strand at 101.305 kb on + strand at 101.306 kb on - strand at 101.345 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 99,290 + -0.2 99,290 + +0.4 99,290 + -0.5 99,291 - -0.6 99,291 - +0.2 99,306 + +0.4 99,326 - +0.7 99,508 - -0.0 99,508 - +0.6 99,624 + +0.1 99,624 + +0.4 99,625 - +0.5 99,747 - H281DRAFT_03994 0.71 -0.1 99,796 + +0.8 99,796 + +0.6 99,797 - -1.7 99,805 + +0.3 99,812 + +0.7 99,812 + +1.3 99,835 + +0.8 99,938 + +0.8 99,950 - +0.1 99,951 + +3.6 100,071 + +1.2 100,187 + -0.6 100,188 - +0.1 100,246 + H281DRAFT_03995 0.29 -0.3 100,246 + H281DRAFT_03995 0.29 -1.1 100,246 + H281DRAFT_03995 0.29 +0.1 100,247 - H281DRAFT_03995 0.30 -1.0 100,349 + +0.1 100,349 + -1.0 100,390 - +0.3 100,390 - -0.1 100,583 + -1.7 100,583 + -1.0 100,584 - +0.3 100,803 + H281DRAFT_03996 0.29 +0.5 101,136 + H281DRAFT_03996 0.85 +0.4 101,137 - H281DRAFT_03996 0.85 -0.5 101,192 + -1.5 101,192 + -0.4 101,192 + -1.5 101,192 + +0.1 101,192 + +1.4 101,193 - -2.1 101,193 - -0.5 101,193 - -1.2 101,193 - -0.4 101,305 + +2.5 101,306 - +0.1 101,345 + -0.4
Or see this region's nucleotide sequence