Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03534 and H281DRAFT_03535 are separated by 109 nucleotides H281DRAFT_03535 and H281DRAFT_03536 are separated by 35 nucleotides H281DRAFT_03536 and H281DRAFT_03537 are separated by 267 nucleotides
H281DRAFT_03534: H281DRAFT_03534 - transcriptional regulator, IclR family, at 32,256 to 33,047
_03534
H281DRAFT_03535: H281DRAFT_03535 - hypothetical protein, at 33,157 to 33,702
_03535
H281DRAFT_03536: H281DRAFT_03536 - acetyltransferase, at 33,738 to 36,218
_03536
H281DRAFT_03537: H281DRAFT_03537 - DNA-binding transcriptional regulator, LysR family, at 36,486 to 37,355
_03537
Position (kb) 33
34
35
36
37 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 32.961 kb on + strand, within H281DRAFT_03534 at 32.972 kb on + strand at 33.092 kb on + strand at 33.093 kb on - strand at 33.397 kb on + strand, within H281DRAFT_03535 at 33.398 kb on - strand, within H281DRAFT_03535 at 33.398 kb on - strand, within H281DRAFT_03535 at 33.552 kb on + strand, within H281DRAFT_03535 at 33.625 kb on + strand, within H281DRAFT_03535 at 33.625 kb on + strand, within H281DRAFT_03535 at 33.626 kb on - strand, within H281DRAFT_03535 at 33.626 kb on - strand, within H281DRAFT_03535 at 33.912 kb on + strand at 33.912 kb on + strand at 33.912 kb on + strand at 33.912 kb on + strand at 33.912 kb on + strand at 33.913 kb on - strand at 34.127 kb on + strand, within H281DRAFT_03536 at 34.158 kb on + strand, within H281DRAFT_03536 at 34.256 kb on + strand, within H281DRAFT_03536 at 34.257 kb on - strand, within H281DRAFT_03536 at 34.257 kb on - strand, within H281DRAFT_03536 at 34.378 kb on + strand, within H281DRAFT_03536 at 34.398 kb on - strand, within H281DRAFT_03536 at 34.486 kb on + strand, within H281DRAFT_03536 at 34.543 kb on + strand, within H281DRAFT_03536 at 34.543 kb on + strand, within H281DRAFT_03536 at 34.543 kb on + strand, within H281DRAFT_03536 at 34.544 kb on - strand, within H281DRAFT_03536 at 34.544 kb on - strand, within H281DRAFT_03536 at 35.294 kb on + strand, within H281DRAFT_03536 at 35.439 kb on + strand, within H281DRAFT_03536 at 35.440 kb on - strand, within H281DRAFT_03536 at 35.469 kb on - strand, within H281DRAFT_03536 at 35.469 kb on - strand, within H281DRAFT_03536 at 35.470 kb on + strand, within H281DRAFT_03536 at 35.623 kb on + strand, within H281DRAFT_03536 at 35.978 kb on + strand at 35.979 kb on - strand at 35.979 kb on - strand at 36.281 kb on + strand at 36.282 kb on - strand at 36.485 kb on + strand at 36.485 kb on + strand at 36.485 kb on + strand at 36.486 kb on - strand at 36.486 kb on - strand at 36.486 kb on - strand at 36.486 kb on - strand at 36.486 kb on - strand at 36.571 kb on + strand at 36.571 kb on + strand at 36.788 kb on + strand, within H281DRAFT_03537 at 36.788 kb on + strand, within H281DRAFT_03537 at 36.820 kb on + strand, within H281DRAFT_03537 at 36.821 kb on - strand, within H281DRAFT_03537 at 37.191 kb on - strand, within H281DRAFT_03537
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 32,961 + H281DRAFT_03534 0.89 -2.3 32,972 + -0.2 33,092 + -0.8 33,093 - -0.1 33,397 + H281DRAFT_03535 0.44 +1.1 33,398 - H281DRAFT_03535 0.44 -2.5 33,398 - H281DRAFT_03535 0.44 +0.6 33,552 + H281DRAFT_03535 0.72 +0.3 33,625 + H281DRAFT_03535 0.86 -0.0 33,625 + H281DRAFT_03535 0.86 +0.9 33,626 - H281DRAFT_03535 0.86 +0.3 33,626 - H281DRAFT_03535 0.86 +0.1 33,912 + +0.8 33,912 + -0.3 33,912 + +1.1 33,912 + +1.0 33,912 + +0.9 33,913 - +0.1 34,127 + H281DRAFT_03536 0.16 +0.7 34,158 + H281DRAFT_03536 0.17 +0.6 34,256 + H281DRAFT_03536 0.21 +0.8 34,257 - H281DRAFT_03536 0.21 +0.3 34,257 - H281DRAFT_03536 0.21 +1.3 34,378 + H281DRAFT_03536 0.26 +0.2 34,398 - H281DRAFT_03536 0.27 -0.3 34,486 + H281DRAFT_03536 0.30 +0.4 34,543 + H281DRAFT_03536 0.32 +1.1 34,543 + H281DRAFT_03536 0.32 +0.5 34,543 + H281DRAFT_03536 0.32 +0.7 34,544 - H281DRAFT_03536 0.32 +2.4 34,544 - H281DRAFT_03536 0.32 +1.4 35,294 + H281DRAFT_03536 0.63 +0.5 35,439 + H281DRAFT_03536 0.69 +1.1 35,440 - H281DRAFT_03536 0.69 +0.2 35,469 - H281DRAFT_03536 0.70 +0.5 35,469 - H281DRAFT_03536 0.70 +0.7 35,470 + H281DRAFT_03536 0.70 +0.5 35,623 + H281DRAFT_03536 0.76 +0.4 35,978 + +1.4 35,979 - -0.3 35,979 - +0.6 36,281 + +0.9 36,282 - -1.4 36,485 + -0.5 36,485 + -0.3 36,485 + +0.0 36,486 - -3.3 36,486 - -0.6 36,486 - -2.3 36,486 - -0.5 36,486 - -0.8 36,571 + -0.7 36,571 + -1.4 36,788 + H281DRAFT_03537 0.35 +1.7 36,788 + H281DRAFT_03537 0.35 -1.3 36,820 + H281DRAFT_03537 0.38 -1.2 36,821 - H281DRAFT_03537 0.39 +0.5 37,191 - H281DRAFT_03537 0.81 -1.9
Or see this region's nucleotide sequence