Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02660 and H281DRAFT_02661 are separated by 139 nucleotides H281DRAFT_02661 and H281DRAFT_02662 are separated by 146 nucleotides
H281DRAFT_02660: H281DRAFT_02660 - formamidase, at 240,175 to 241,206
_02660
H281DRAFT_02661: H281DRAFT_02661 - transcriptional regulator, AraC family with amidase-like domain, at 241,346 to 243,721
_02661
H281DRAFT_02662: H281DRAFT_02662 - Predicted xylanase/chitin deacetylase, at 243,868 to 244,770
_02662
Position (kb) 241
242
243
244 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 240.347 kb on - strand, within H281DRAFT_02660 at 240.449 kb on - strand, within H281DRAFT_02660 at 240.544 kb on + strand, within H281DRAFT_02660 at 240.584 kb on - strand, within H281DRAFT_02660 at 240.590 kb on - strand, within H281DRAFT_02660 at 240.590 kb on - strand, within H281DRAFT_02660 at 240.590 kb on - strand, within H281DRAFT_02660 at 240.833 kb on + strand, within H281DRAFT_02660 at 240.834 kb on - strand, within H281DRAFT_02660 at 240.976 kb on + strand, within H281DRAFT_02660 at 241.656 kb on - strand, within H281DRAFT_02661 at 241.753 kb on - strand, within H281DRAFT_02661 at 242.412 kb on - strand, within H281DRAFT_02661 at 242.911 kb on - strand, within H281DRAFT_02661 at 243.003 kb on - strand, within H281DRAFT_02661 at 243.414 kb on - strand, within H281DRAFT_02661 at 243.428 kb on + strand at 243.666 kb on + strand at 243.724 kb on + strand at 243.812 kb on - strand at 244.563 kb on - strand, within H281DRAFT_02662 at 244.634 kb on - strand, within H281DRAFT_02662
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 240,347 - H281DRAFT_02660 0.17 -2.1 240,449 - H281DRAFT_02660 0.27 +0.1 240,544 + H281DRAFT_02660 0.36 +0.3 240,584 - H281DRAFT_02660 0.40 +0.9 240,590 - H281DRAFT_02660 0.40 -0.1 240,590 - H281DRAFT_02660 0.40 -0.1 240,590 - H281DRAFT_02660 0.40 -1.2 240,833 + H281DRAFT_02660 0.64 -0.2 240,834 - H281DRAFT_02660 0.64 +0.6 240,976 + H281DRAFT_02660 0.78 +0.4 241,656 - H281DRAFT_02661 0.13 +0.3 241,753 - H281DRAFT_02661 0.17 +0.6 242,412 - H281DRAFT_02661 0.45 +0.1 242,911 - H281DRAFT_02661 0.66 -0.4 243,003 - H281DRAFT_02661 0.70 +0.8 243,414 - H281DRAFT_02661 0.87 -0.0 243,428 + -3.1 243,666 + +0.4 243,724 + +0.1 243,812 - -1.4 244,563 - H281DRAFT_02662 0.77 +0.1 244,634 - H281DRAFT_02662 0.85 +1.8
Or see this region's nucleotide sequence