Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02542 and H281DRAFT_02543 are separated by 158 nucleotides H281DRAFT_02543 and H281DRAFT_02544 are separated by 105 nucleotides H281DRAFT_02544 and H281DRAFT_02545 are separated by 233 nucleotides
H281DRAFT_02542: H281DRAFT_02542 - 2-Methylisocitrate lyase, PEP mutase family, at 117,410 to 118,282
_02542
H281DRAFT_02543: H281DRAFT_02543 - GntR family transcriptional regulator, at 118,441 to 119,238
_02543
H281DRAFT_02544: H281DRAFT_02544 - Nicotinamidase-related amidase, at 119,344 to 119,907
_02544
H281DRAFT_02545: H281DRAFT_02545 - tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC, at 120,141 to 120,875
_02545
Position (kb) 118
119
120 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8
9
10
11 at 117.494 kb on - strand at 117.640 kb on + strand, within H281DRAFT_02542 at 117.641 kb on - strand, within H281DRAFT_02542 at 118.205 kb on + strand at 118.205 kb on + strand at 118.312 kb on + strand at 118.312 kb on + strand at 118.422 kb on + strand at 118.438 kb on - strand at 118.480 kb on - strand at 118.480 kb on - strand at 118.495 kb on + strand at 118.495 kb on + strand at 118.704 kb on + strand, within H281DRAFT_02543 at 118.893 kb on + strand, within H281DRAFT_02543 at 119.123 kb on + strand, within H281DRAFT_02543 at 119.285 kb on + strand at 119.286 kb on - strand at 119.319 kb on + strand at 119.320 kb on - strand at 119.332 kb on - strand at 119.338 kb on + strand at 119.338 kb on + strand at 119.339 kb on - strand at 119.479 kb on + strand, within H281DRAFT_02544 at 119.480 kb on - strand, within H281DRAFT_02544 at 119.480 kb on - strand, within H281DRAFT_02544 at 119.701 kb on - strand, within H281DRAFT_02544 at 119.711 kb on + strand, within H281DRAFT_02544 at 119.712 kb on - strand, within H281DRAFT_02544 at 119.712 kb on - strand, within H281DRAFT_02544 at 119.712 kb on - strand, within H281DRAFT_02544 at 119.712 kb on - strand, within H281DRAFT_02544 at 119.752 kb on + strand, within H281DRAFT_02544 at 119.873 kb on - strand at 119.873 kb on - strand at 119.873 kb on - strand at 120.094 kb on - strand at 120.094 kb on - strand at 120.125 kb on + strand at 120.125 kb on + strand at 120.125 kb on + strand at 120.125 kb on + strand at 120.126 kb on - strand at 120.169 kb on + strand at 120.169 kb on + strand at 120.169 kb on + strand at 120.169 kb on + strand at 120.169 kb on + strand at 120.170 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 117,494 - +2.6 117,640 + H281DRAFT_02542 0.26 -0.1 117,641 - H281DRAFT_02542 0.26 +2.4 118,205 + +0.5 118,205 + -0.4 118,312 + -1.1 118,312 + -1.6 118,422 + +0.5 118,438 - +5.9 118,480 - +10.6 118,480 - +11.0 118,495 + +8.5 118,495 + +9.0 118,704 + H281DRAFT_02543 0.33 +10.3 118,893 + H281DRAFT_02543 0.57 +10.5 119,123 + H281DRAFT_02543 0.85 +11.4 119,285 + -3.1 119,286 - -0.1 119,319 + +0.0 119,320 - -0.3 119,332 - -0.6 119,338 + +1.0 119,338 + +0.1 119,339 - -0.7 119,479 + H281DRAFT_02544 0.24 -0.1 119,480 - H281DRAFT_02544 0.24 -0.6 119,480 - H281DRAFT_02544 0.24 -0.9 119,701 - H281DRAFT_02544 0.63 +0.2 119,711 + H281DRAFT_02544 0.65 +0.0 119,712 - H281DRAFT_02544 0.65 -0.8 119,712 - H281DRAFT_02544 0.65 -0.8 119,712 - H281DRAFT_02544 0.65 +0.2 119,712 - H281DRAFT_02544 0.65 -0.0 119,752 + H281DRAFT_02544 0.72 -0.0 119,873 - -0.3 119,873 - +0.3 119,873 - -1.8 120,094 - -0.9 120,094 - +0.3 120,125 + +1.2 120,125 + +1.0 120,125 + -0.9 120,125 + -0.8 120,126 - -0.2 120,169 + -0.2 120,169 + -0.1 120,169 + -0.5 120,169 + -0.5 120,169 + +0.3 120,170 - +0.3
Or see this region's nucleotide sequence