Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02010 and H281DRAFT_02011 are separated by 165 nucleotides H281DRAFT_02011 and H281DRAFT_02012 are separated by 247 nucleotides
H281DRAFT_02010: H281DRAFT_02010 - glutathione synthase, at 127,096 to 128,052
_02010
H281DRAFT_02011: H281DRAFT_02011 - glutamate--cysteine ligase, at 128,218 to 129,507
_02011
H281DRAFT_02012: H281DRAFT_02012 - ammonium transporter, at 129,755 to 131,248
_02012
Position (kb) 128
129
130 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 127.532 kb on - strand, within H281DRAFT_02010 at 127.757 kb on + strand, within H281DRAFT_02010 at 127.757 kb on + strand, within H281DRAFT_02010 at 127.757 kb on + strand, within H281DRAFT_02010 at 127.757 kb on + strand, within H281DRAFT_02010 at 127.757 kb on + strand, within H281DRAFT_02010 at 127.757 kb on + strand, within H281DRAFT_02010 at 127.758 kb on - strand, within H281DRAFT_02010 at 127.758 kb on - strand, within H281DRAFT_02010 at 127.758 kb on - strand, within H281DRAFT_02010 at 127.758 kb on - strand, within H281DRAFT_02010 at 127.849 kb on - strand, within H281DRAFT_02010 at 127.949 kb on + strand, within H281DRAFT_02010 at 127.949 kb on + strand, within H281DRAFT_02010 at 127.949 kb on + strand, within H281DRAFT_02010 at 127.949 kb on + strand, within H281DRAFT_02010 at 127.949 kb on + strand, within H281DRAFT_02010 at 127.949 kb on + strand, within H281DRAFT_02010 at 127.950 kb on - strand, within H281DRAFT_02010 at 127.950 kb on - strand, within H281DRAFT_02010 at 127.956 kb on + strand, within H281DRAFT_02010 at 127.957 kb on - strand at 127.957 kb on - strand at 127.957 kb on - strand at 127.957 kb on - strand at 127.957 kb on - strand at 127.995 kb on + strand at 127.995 kb on + strand at 127.996 kb on - strand at 127.996 kb on - strand at 128.006 kb on + strand at 128.006 kb on + strand at 128.007 kb on - strand at 128.007 kb on - strand at 128.022 kb on + strand at 128.094 kb on + strand at 128.095 kb on - strand at 128.095 kb on - strand at 128.095 kb on - strand at 128.095 kb on - strand at 128.219 kb on + strand at 128.219 kb on + strand at 128.220 kb on - strand at 128.297 kb on + strand at 128.297 kb on + strand at 128.297 kb on + strand at 128.298 kb on - strand at 128.298 kb on - strand at 128.298 kb on - strand at 128.298 kb on - strand at 128.298 kb on - strand at 128.298 kb on - strand at 128.298 kb on - strand at 128.298 kb on - strand at 128.301 kb on + strand at 128.301 kb on + strand at 128.301 kb on + strand at 128.301 kb on + strand at 128.301 kb on + strand at 128.301 kb on + strand at 128.301 kb on + strand at 128.302 kb on - strand at 128.302 kb on - strand at 128.302 kb on - strand at 128.302 kb on - strand at 128.302 kb on - strand at 128.302 kb on - strand at 128.302 kb on - strand at 128.302 kb on - strand at 128.302 kb on - strand at 128.303 kb on + strand at 128.303 kb on + strand at 128.303 kb on + strand at 128.303 kb on + strand at 128.303 kb on + strand at 128.303 kb on + strand at 128.303 kb on + strand at 128.303 kb on + strand at 128.304 kb on - strand at 128.304 kb on - strand at 128.304 kb on - strand at 128.304 kb on - strand at 128.304 kb on - strand at 128.304 kb on - strand at 128.304 kb on - strand at 128.439 kb on - strand, within H281DRAFT_02011 at 128.439 kb on - strand, within H281DRAFT_02011 at 128.469 kb on + strand, within H281DRAFT_02011 at 128.469 kb on + strand, within H281DRAFT_02011 at 128.469 kb on + strand, within H281DRAFT_02011 at 128.469 kb on + strand, within H281DRAFT_02011 at 128.470 kb on - strand, within H281DRAFT_02011 at 128.470 kb on - strand, within H281DRAFT_02011 at 128.470 kb on - strand, within H281DRAFT_02011 at 128.470 kb on - strand, within H281DRAFT_02011 at 128.470 kb on - strand, within H281DRAFT_02011 at 128.471 kb on + strand, within H281DRAFT_02011 at 128.471 kb on + strand, within H281DRAFT_02011 at 128.471 kb on + strand, within H281DRAFT_02011 at 128.471 kb on + strand, within H281DRAFT_02011 at 128.472 kb on - strand, within H281DRAFT_02011 at 128.516 kb on + strand, within H281DRAFT_02011 at 128.516 kb on + strand, within H281DRAFT_02011 at 128.517 kb on - strand, within H281DRAFT_02011 at 128.517 kb on - strand, within H281DRAFT_02011 at 128.645 kb on + strand, within H281DRAFT_02011 at 128.646 kb on - strand, within H281DRAFT_02011 at 128.646 kb on - strand, within H281DRAFT_02011 at 128.646 kb on - strand, within H281DRAFT_02011 at 128.646 kb on - strand, within H281DRAFT_02011 at 128.675 kb on + strand, within H281DRAFT_02011 at 128.676 kb on - strand, within H281DRAFT_02011 at 128.676 kb on - strand, within H281DRAFT_02011 at 128.676 kb on - strand, within H281DRAFT_02011 at 128.805 kb on - strand at 128.868 kb on - strand, within H281DRAFT_02011 at 128.930 kb on + strand, within H281DRAFT_02011 at 128.931 kb on - strand, within H281DRAFT_02011 at 128.931 kb on - strand, within H281DRAFT_02011 at 129.380 kb on + strand at 129.380 kb on + strand at 129.380 kb on + strand at 129.380 kb on + strand at 129.381 kb on - strand at 129.381 kb on - strand at 129.482 kb on - strand at 129.489 kb on + strand at 129.493 kb on + strand at 129.493 kb on + strand at 129.493 kb on + strand at 129.494 kb on - strand at 129.494 kb on - strand at 129.539 kb on + strand at 129.539 kb on + strand at 129.539 kb on + strand at 129.618 kb on + strand at 129.646 kb on + strand at 129.757 kb on - strand at 129.876 kb on + strand at 129.876 kb on + strand at 129.876 kb on + strand at 129.876 kb on + strand at 129.876 kb on + strand at 129.876 kb on + strand at 130.183 kb on + strand, within H281DRAFT_02012 at 130.238 kb on + strand, within H281DRAFT_02012 at 130.238 kb on + strand, within H281DRAFT_02012 at 130.239 kb on - strand, within H281DRAFT_02012
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 127,532 - H281DRAFT_02010 0.46 +0.7 127,757 + H281DRAFT_02010 0.69 -1.8 127,757 + H281DRAFT_02010 0.69 -0.4 127,757 + H281DRAFT_02010 0.69 -1.9 127,757 + H281DRAFT_02010 0.69 -0.8 127,757 + H281DRAFT_02010 0.69 +0.7 127,757 + H281DRAFT_02010 0.69 -1.2 127,758 - H281DRAFT_02010 0.69 -0.9 127,758 - H281DRAFT_02010 0.69 -4.0 127,758 - H281DRAFT_02010 0.69 -3.3 127,758 - H281DRAFT_02010 0.69 -1.8 127,849 - H281DRAFT_02010 0.79 -0.5 127,949 + H281DRAFT_02010 0.89 -1.0 127,949 + H281DRAFT_02010 0.89 -1.8 127,949 + H281DRAFT_02010 0.89 -3.4 127,949 + H281DRAFT_02010 0.89 +0.2 127,949 + H281DRAFT_02010 0.89 -1.3 127,949 + H281DRAFT_02010 0.89 -3.4 127,950 - H281DRAFT_02010 0.89 +0.9 127,950 - H281DRAFT_02010 0.89 -1.4 127,956 + H281DRAFT_02010 0.90 -0.5 127,957 - +0.6 127,957 - -2.0 127,957 - -1.9 127,957 - -1.9 127,957 - -1.7 127,995 + -0.6 127,995 + -2.6 127,996 - -1.2 127,996 - -0.7 128,006 + -1.0 128,006 + -3.7 128,007 - -0.6 128,007 - -0.7 128,022 + -1.1 128,094 + -3.1 128,095 - -0.1 128,095 - +0.4 128,095 - -0.7 128,095 - -0.9 128,219 + -0.4 128,219 + -0.8 128,220 - +0.1 128,297 + -0.2 128,297 + -0.5 128,297 + +0.2 128,298 - -0.5 128,298 - +1.2 128,298 - -2.2 128,298 - -0.1 128,298 - +0.4 128,298 - -1.2 128,298 - -1.2 128,298 - -0.8 128,301 + +0.4 128,301 + +0.3 128,301 + -0.6 128,301 + +1.4 128,301 + +0.8 128,301 + -1.2 128,301 + -0.4 128,302 - -0.3 128,302 - +0.9 128,302 - +0.7 128,302 - -0.1 128,302 - -0.6 128,302 - -0.8 128,302 - +0.1 128,302 - -1.5 128,302 - +0.7 128,303 + +0.7 128,303 + +0.4 128,303 + +0.8 128,303 + -0.2 128,303 + -0.2 128,303 + -0.8 128,303 + +0.9 128,303 + +0.9 128,304 - +0.4 128,304 - +0.3 128,304 - +1.6 128,304 - +0.1 128,304 - +0.3 128,304 - -0.0 128,304 - +0.6 128,439 - H281DRAFT_02011 0.17 +0.2 128,439 - H281DRAFT_02011 0.17 +0.1 128,469 + H281DRAFT_02011 0.19 -0.4 128,469 + H281DRAFT_02011 0.19 -0.3 128,469 + H281DRAFT_02011 0.19 +0.1 128,469 + H281DRAFT_02011 0.19 +1.1 128,470 - H281DRAFT_02011 0.20 -0.1 128,470 - H281DRAFT_02011 0.20 +0.1 128,470 - H281DRAFT_02011 0.20 -0.6 128,470 - H281DRAFT_02011 0.20 +0.2 128,470 - H281DRAFT_02011 0.20 +0.1 128,471 + H281DRAFT_02011 0.20 -0.0 128,471 + H281DRAFT_02011 0.20 +0.1 128,471 + H281DRAFT_02011 0.20 -1.6 128,471 + H281DRAFT_02011 0.20 +0.2 128,472 - H281DRAFT_02011 0.20 +0.5 128,516 + H281DRAFT_02011 0.23 +0.6 128,516 + H281DRAFT_02011 0.23 +0.2 128,517 - H281DRAFT_02011 0.23 +0.5 128,517 - H281DRAFT_02011 0.23 +0.0 128,645 + H281DRAFT_02011 0.33 -0.7 128,646 - H281DRAFT_02011 0.33 +2.6 128,646 - H281DRAFT_02011 0.33 -0.2 128,646 - H281DRAFT_02011 0.33 -2.4 128,646 - H281DRAFT_02011 0.33 +0.4 128,675 + H281DRAFT_02011 0.35 -0.1 128,676 - H281DRAFT_02011 0.36 +1.1 128,676 - H281DRAFT_02011 0.36 +0.9 128,676 - H281DRAFT_02011 0.36 +0.3 128,805 - -0.7 128,868 - H281DRAFT_02011 0.50 +1.2 128,930 + H281DRAFT_02011 0.55 -0.3 128,931 - H281DRAFT_02011 0.55 +1.5 128,931 - H281DRAFT_02011 0.55 +0.4 129,380 + -0.7 129,380 + -0.5 129,380 + +0.6 129,380 + +0.9 129,381 - +0.2 129,381 - -0.7 129,482 - -3.1 129,489 + +0.3 129,493 + -3.3 129,493 + -1.1 129,493 + +1.1 129,494 - +0.4 129,494 - +0.5 129,539 + +0.5 129,539 + -0.2 129,539 + +1.0 129,618 + -1.1 129,646 + -0.1 129,757 - -0.7 129,876 + +0.5 129,876 + +0.8 129,876 + -0.3 129,876 + -0.7 129,876 + +1.1 129,876 + +1.4 130,183 + H281DRAFT_02012 0.29 +0.0 130,238 + H281DRAFT_02012 0.32 -0.6 130,238 + H281DRAFT_02012 0.32 +0.4 130,239 - H281DRAFT_02012 0.32 +0.1
Or see this region's nucleotide sequence