Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01835 and H281DRAFT_01836 are separated by 103 nucleotides H281DRAFT_01836 and H281DRAFT_01837 are separated by 311 nucleotides H281DRAFT_01837 and H281DRAFT_01838 are separated by 285 nucleotides
H281DRAFT_01835: H281DRAFT_01835 - DNA-binding transcriptional regulator, LysR family, at 742,711 to 743,616
_01835
H281DRAFT_01836: H281DRAFT_01836 - hypothetical protein, at 743,720 to 744,448
_01836
H281DRAFT_01837: H281DRAFT_01837 - hypothetical protein, at 744,760 to 745,008
_01837
H281DRAFT_01838: H281DRAFT_01838 - regulator RcnB of Ni and Co efflux, at 745,294 to 745,704
_01838
Position (kb) 743
744
745 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 743.191 kb on + strand, within H281DRAFT_01835 at 743.347 kb on - strand, within H281DRAFT_01835 at 743.512 kb on + strand, within H281DRAFT_01835 at 743.513 kb on - strand, within H281DRAFT_01835 at 743.515 kb on + strand, within H281DRAFT_01835 at 743.516 kb on - strand, within H281DRAFT_01835 at 743.516 kb on - strand, within H281DRAFT_01835 at 743.525 kb on - strand, within H281DRAFT_01835 at 743.537 kb on + strand at 743.538 kb on - strand at 743.538 kb on - strand at 743.538 kb on - strand at 743.805 kb on - strand, within H281DRAFT_01836 at 743.997 kb on + strand, within H281DRAFT_01836 at 744.029 kb on + strand, within H281DRAFT_01836 at 744.530 kb on + strand at 744.531 kb on - strand at 744.563 kb on + strand at 744.567 kb on + strand at 744.615 kb on - strand at 744.670 kb on + strand at 744.687 kb on + strand at 744.688 kb on - strand at 744.712 kb on + strand at 744.715 kb on + strand at 744.770 kb on + strand at 744.771 kb on - strand at 744.771 kb on - strand at 744.771 kb on - strand at 744.900 kb on + strand, within H281DRAFT_01837 at 745.073 kb on + strand at 745.074 kb on - strand at 745.152 kb on + strand at 745.152 kb on + strand at 745.152 kb on + strand at 745.215 kb on + strand at 745.215 kb on + strand at 745.289 kb on - strand at 745.289 kb on - strand at 745.289 kb on - strand at 745.292 kb on + strand at 745.292 kb on + strand at 745.293 kb on - strand at 745.293 kb on - strand at 745.299 kb on + strand at 745.299 kb on + strand at 745.310 kb on + strand at 745.311 kb on - strand at 745.311 kb on - strand at 745.338 kb on + strand, within H281DRAFT_01838 at 745.339 kb on - strand, within H281DRAFT_01838 at 745.434 kb on + strand, within H281DRAFT_01838
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 743,191 + H281DRAFT_01835 0.53 +0.0 743,347 - H281DRAFT_01835 0.70 -0.1 743,512 + H281DRAFT_01835 0.88 -0.2 743,513 - H281DRAFT_01835 0.89 +0.1 743,515 + H281DRAFT_01835 0.89 -2.4 743,516 - H281DRAFT_01835 0.89 +0.4 743,516 - H281DRAFT_01835 0.89 -0.5 743,525 - H281DRAFT_01835 0.90 +0.8 743,537 + -0.6 743,538 - +0.5 743,538 - -0.3 743,538 - -0.4 743,805 - H281DRAFT_01836 0.12 -0.3 743,997 + H281DRAFT_01836 0.38 +0.4 744,029 + H281DRAFT_01836 0.42 +3.2 744,530 + -2.0 744,531 - -1.1 744,563 + -1.3 744,567 + -0.8 744,615 - +0.1 744,670 + +0.2 744,687 + -1.2 744,688 - +0.6 744,712 + +0.3 744,715 + -0.5 744,770 + +0.6 744,771 - +0.3 744,771 - -1.9 744,771 - +0.1 744,900 + H281DRAFT_01837 0.56 -0.6 745,073 + +0.2 745,074 - -2.0 745,152 + -1.0 745,152 + -0.4 745,152 + +0.3 745,215 + -0.6 745,215 + +0.2 745,289 - +1.0 745,289 - +0.0 745,289 - +0.3 745,292 + +0.9 745,292 + +2.0 745,293 - +0.4 745,293 - -0.5 745,299 + +0.1 745,299 + -0.8 745,310 + +1.0 745,311 - -0.1 745,311 - +0.4 745,338 + H281DRAFT_01838 0.11 -0.2 745,339 - H281DRAFT_01838 0.11 +0.3 745,434 + H281DRAFT_01838 0.34 -0.9
Or see this region's nucleotide sequence