Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00265 and H281DRAFT_00266 are separated by 341 nucleotides H281DRAFT_00266 and H281DRAFT_00267 are separated by 84 nucleotides H281DRAFT_00267 and H281DRAFT_00268 are separated by 200 nucleotides
H281DRAFT_00265: H281DRAFT_00265 - DNA topoisomerase IV subunit A, at 279,933 to 282,257
_00265
H281DRAFT_00266: H281DRAFT_00266 - Uncharacterized membrane protein, at 282,599 to 283,057
_00266
H281DRAFT_00267: H281DRAFT_00267 - chromate transporter, at 283,142 to 284,350
_00267
H281DRAFT_00268: H281DRAFT_00268 - diguanylate cyclase/phosphodiesterase, at 284,551 to 286,902
_00268
Position (kb) 283
284
285 Strain fitness (log2 ratio) -2
-1
0
1 at 282.234 kb on - strand at 282.234 kb on - strand at 282.357 kb on + strand at 282.369 kb on - strand at 282.379 kb on - strand at 282.464 kb on + strand at 282.464 kb on + strand at 282.465 kb on - strand at 282.593 kb on + strand at 282.593 kb on + strand at 282.594 kb on - strand at 282.594 kb on - strand at 282.594 kb on - strand at 282.631 kb on - strand at 282.813 kb on + strand, within H281DRAFT_00266 at 283.004 kb on - strand, within H281DRAFT_00266 at 283.004 kb on - strand, within H281DRAFT_00266 at 283.178 kb on + strand at 283.197 kb on + strand at 283.198 kb on - strand at 283.207 kb on - strand at 283.247 kb on + strand at 283.248 kb on - strand at 283.295 kb on - strand, within H281DRAFT_00267 at 283.675 kb on - strand, within H281DRAFT_00267 at 283.830 kb on + strand, within H281DRAFT_00267 at 283.830 kb on + strand, within H281DRAFT_00267 at 283.830 kb on + strand, within H281DRAFT_00267 at 283.830 kb on + strand, within H281DRAFT_00267 at 284.339 kb on + strand at 284.339 kb on + strand at 284.340 kb on - strand at 284.446 kb on + strand at 284.459 kb on + strand at 284.460 kb on - strand at 284.552 kb on + strand at 285.129 kb on - strand, within H281DRAFT_00268
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 282,234 - +0.5 282,234 - +0.9 282,357 + -1.2 282,369 - +0.1 282,379 - -2.5 282,464 + -0.2 282,464 + +1.1 282,465 - +0.6 282,593 + +0.7 282,593 + +0.3 282,594 - +1.0 282,594 - -1.2 282,594 - -0.7 282,631 - +0.4 282,813 + H281DRAFT_00266 0.47 +0.5 283,004 - H281DRAFT_00266 0.88 +1.6 283,004 - H281DRAFT_00266 0.88 -0.2 283,178 + -0.1 283,197 + -0.6 283,198 - +0.1 283,207 - +0.0 283,247 + +0.3 283,248 - +0.3 283,295 - H281DRAFT_00267 0.13 -0.2 283,675 - H281DRAFT_00267 0.44 +1.2 283,830 + H281DRAFT_00267 0.57 +1.1 283,830 + H281DRAFT_00267 0.57 +1.2 283,830 + H281DRAFT_00267 0.57 -0.6 283,830 + H281DRAFT_00267 0.57 +1.6 284,339 + +0.3 284,339 + -0.4 284,340 - +0.9 284,446 + +0.2 284,459 + -0.6 284,460 - -0.0 284,552 + +0.2 285,129 - H281DRAFT_00268 0.25 +1.5
Or see this region's nucleotide sequence