Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25890

Experiment: m.b. Lomefloxacin 0.00078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Lomefloxacin 0.00078125 mM
2,697,251	+		PGA1_c25870	0.88	-0.1
2,697,251	+		PGA1_c25870	0.88	-0.1
2,697,251	+		PGA1_c25870	0.88	-0.6
2,697,251	+		PGA1_c25870	0.88	+0.5
2,697,259	-		PGA1_c25870	0.89	+1.2
2,697,265	+				+0.9
2,697,272	+				-0.2
2,697,280	-				-2.7
2,697,281	-				-0.3
2,697,283	+				-0.4
2,697,283	+				+0.1
2,697,285	+				-0.8
2,697,285	+				-0.2
2,697,285	+				-0.4
2,697,285	+				-0.3
2,697,285	+				+0.7
2,697,285	+				+0.3
2,697,285	+				+0.5
2,697,285	+				+0.6
2,697,285	+				+0.1
2,697,285	+				-1.7
2,697,285	+				-0.7
2,697,285	+				+0.7
2,697,285	+				+1.1
2,697,285	+				+0.3
2,697,285	+				-0.9
2,697,291	-				+0.8
2,697,291	-				-0.7
2,697,293	-				-0.3
2,697,293	-				-0.2
2,697,293	-				+0.0
2,697,293	-				-0.7
2,697,323	+				-0.6
2,697,333	-				-0.0
2,697,333	-				+0.2
2,697,335	-				+1.1
2,697,337	+				+1.3
2,697,337	+				+0.5
2,697,352	+		PGA1_c25880	0.14	+0.5
2,697,361	+		PGA1_c25880	0.17	+0.8
2,697,377	+		PGA1_c25880	0.23	+0.7
2,697,377	+		PGA1_c25880	0.23	-0.3
2,697,377	+		PGA1_c25880	0.23	+0.3
2,697,377	+		PGA1_c25880	0.23	-0.0
2,697,408	+		PGA1_c25880	0.34	+0.3
2,697,426	-		PGA1_c25880	0.40	+0.4
2,697,470	+		PGA1_c25880	0.56	-0.6
2,697,470	+		PGA1_c25880	0.56	-0.1
2,697,470	+		PGA1_c25880	0.56	-0.1
2,697,470	+		PGA1_c25880	0.56	+0.2
2,697,470	+		PGA1_c25880	0.56	-1.8
2,697,470	+		PGA1_c25880	0.56	+0.5
2,697,478	-		PGA1_c25880	0.59	+0.9
2,697,478	-		PGA1_c25880	0.59	-0.4
2,697,478	-		PGA1_c25880	0.59	-2.3
2,697,478	-		PGA1_c25880	0.59	+0.2
2,697,480	+		PGA1_c25880	0.60	-0.7
2,697,486	+		PGA1_c25880	0.62	+0.2
2,697,492	-		PGA1_c25880	0.64	+0.3
2,697,494	-		PGA1_c25880	0.65	+1.2
2,697,507	+		PGA1_c25880	0.69	-0.3
2,697,550	+		PGA1_c25880	0.84	+0.0
2,697,559	-		PGA1_c25880	0.88	+0.4
2,697,567	+				-0.2
2,697,586	-				-0.4
2,697,586	-				-1.8
2,697,637	+				+0.1
2,697,657	+				+0.1
2,697,716	+				+0.1
2,697,730	-				+0.3
2,697,737	-				-0.4
2,697,742	-				+0.1
2,697,749	-				+0.6
2,697,762	+				-0.2
2,697,784	-				+0.7
2,697,819	-				-0.2
2,697,899	+				+0.1
2,697,899	+				-2.0
2,697,899	+				-0.4
2,697,899	+				-0.4
2,697,900	+				-0.3
2,697,907	-				+0.1
2,697,907	-				+0.0
2,697,907	-				+1.0
2,697,907	-				-0.5
2,697,907	-				+0.4
2,697,907	-				-0.6
2,697,909	+				+0.2
2,697,947	-				+1.0
2,697,948	-				-0.3
2,697,949	+				+0.4
2,697,991	+				+1.1
2,698,000	+				+0.5
2,698,008	-				-0.4
2,698,008	-				+0.1
2,698,023	-				+0.2
2,698,028	-				-0.5
2,698,037	-				-1.0
2,698,047	+				+0.4
2,698,062	-				-0.5
2,698,181	-				+0.7
2,698,191	+				+0.2
2,698,217	+				+0.5
2,698,217	+				-0.1
2,698,226	+				+0.8
2,698,226	+				-0.8
2,698,234	-				+1.3
2,698,278	-				-1.1
2,698,293	-				+0.2
2,698,376	+		PGA1_c25890	0.15	-0.1
2,698,405	-		PGA1_c25890	0.17	+0.6
2,698,452	-		PGA1_c25890	0.22	-0.0
2,698,475	+		PGA1_c25890	0.24	+0.6
2,698,475	+		PGA1_c25890	0.24	+0.4
2,698,498	-		PGA1_c25890	0.26	+0.5
2,698,498	-		PGA1_c25890	0.26	+0.7
2,698,502	+		PGA1_c25890	0.26	+0.3
2,698,509	+		PGA1_c25890	0.27	-0.6
2,698,525	+		PGA1_c25890	0.28	+0.5
2,698,533	+		PGA1_c25890	0.29	+0.7
2,698,548	-		PGA1_c25890	0.30	+0.4
2,698,563	-		PGA1_c25890	0.32	-0.2
2,698,615	-		PGA1_c25890	0.37	+0.4
2,698,653	-		PGA1_c25890	0.40	+0.8
2,698,781	-		PGA1_c25890	0.52	-1.4
2,698,793	+		PGA1_c25890	0.53	+0.3
2,698,874	+		PGA1_c25890	0.61	+0.5
2,698,882	-		PGA1_c25890	0.61	+0.4
2,698,882	-		PGA1_c25890	0.61	+0.1
2,698,884	+		PGA1_c25890	0.61	+0.0
2,698,884	+		PGA1_c25890	0.61	+1.0
2,698,884	+		PGA1_c25890	0.61	-0.5
2,698,884	+		PGA1_c25890	0.61	+0.0
2,698,884	+		PGA1_c25890	0.61	+0.7
2,698,884	+		PGA1_c25890	0.61	+0.2
2,698,892	-		PGA1_c25890	0.62	+0.4
2,698,892	-		PGA1_c25890	0.62	-0.8
2,698,892	-		PGA1_c25890	0.62	-0.3
2,698,892	-		PGA1_c25890	0.62	+0.4
2,698,935	+		PGA1_c25890	0.66	+0.6
2,698,943	-		PGA1_c25890	0.67	+0.1
2,698,943	-		PGA1_c25890	0.67	+0.3
2,699,035	-		PGA1_c25890	0.75	-0.7
2,699,050	-		PGA1_c25890	0.77	+0.7
2,699,093	+		PGA1_c25890	0.81	+0.6
2,699,093	+		PGA1_c25890	0.81	+0.3
2,699,093	+		PGA1_c25890	0.81	-0.0
2,699,093	+		PGA1_c25890	0.81	+0.2
2,699,108	+		PGA1_c25890	0.82	+0.6
2,699,108	+		PGA1_c25890	0.82	+0.2
2,699,116	-		PGA1_c25890	0.83	+1.1
2,699,160	-		PGA1_c25890	0.87	+0.8
2,699,162	+		PGA1_c25890	0.87	-0.5
2,699,162	+		PGA1_c25890	0.87	+0.4
2,699,175	-		PGA1_c25890	0.88	+0.5
2,699,250	+				-0.7
2,699,258	-				+0.1
2,699,315	+				-0.1
2,699,323	-				-0.2
2,699,355	-				-0.9
2,699,379	+				+0.9
2,699,387	-				+0.0
2,699,416	-				-1.2
2,699,635	+		PGA1_c25900	0.32	-0.2
2,699,637	+		PGA1_c25900	0.32	-0.2
2,699,647	+		PGA1_c25900	0.33	-0.6
2,699,652	+		PGA1_c25900	0.34	-0.2
2,699,657	+		PGA1_c25900	0.34	-0.8
2,699,676	-		PGA1_c25900	0.36	-0.7
2,699,760	+		PGA1_c25900	0.44	+0.3
2,699,784	+		PGA1_c25900	0.47	-0.3
2,699,792	-		PGA1_c25900	0.47	+0.2
2,699,910	+		PGA1_c25900	0.59	-0.2
2,699,910	+		PGA1_c25900	0.59	+0.0
2,699,910	+		PGA1_c25900	0.59	+0.5
2,699,911	+		PGA1_c25900	0.59	-1.2
2,699,913	+		PGA1_c25900	0.59	-1.5
2,699,919	-		PGA1_c25900	0.60	+0.8
2,700,047	-		PGA1_c25900	0.72	-1.4
2,700,090	+		PGA1_c25900	0.76	-0.9
2,700,167	+		PGA1_c25900	0.84	-0.4
2,700,176	+		PGA1_c25900	0.85	-0.3
2,700,289	+				-0.6