Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2991 and DvMF_2992 are separated by 143 nucleotides DvMF_2992 and DvMF_R0077 are separated by 405 nucleotides DvMF_R0077 and DvMF_2993 are separated by 274 nucleotides
DvMF_2991: DvMF_2991 - Radical SAM domain protein (RefSeq), at 3,771,865 to 3,773,058
_2991
DvMF_2992: DvMF_2992 - ATPase, P-type (transporting), HAD superfamily, subfamily IC (RefSeq), at 3,773,202 to 3,776,096
_2992
DvMF_R0077: DvMF_R0077 - tRNA-Asn (RefSeq), at 3,776,502 to 3,776,577
_R0077
DvMF_2993: DvMF_2993 - lysyl-tRNA synthetase (RefSeq), at 3,776,852 to 3,778,357
_2993
Position (kb)
3773
3774
3775
3776
3777 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3772.208 kb on + strand, within DvMF_2991 at 3772.333 kb on + strand, within DvMF_2991 at 3772.359 kb on + strand, within DvMF_2991 at 3772.663 kb on - strand, within DvMF_2991 at 3772.942 kb on - strand at 3773.082 kb on + strand at 3773.258 kb on + strand at 3773.306 kb on + strand at 3773.333 kb on - strand at 3773.592 kb on + strand, within DvMF_2992 at 3773.593 kb on - strand, within DvMF_2992 at 3773.640 kb on - strand, within DvMF_2992 at 3773.708 kb on + strand, within DvMF_2992 at 3773.720 kb on + strand, within DvMF_2992 at 3774.290 kb on + strand, within DvMF_2992 at 3774.298 kb on - strand, within DvMF_2992 at 3774.317 kb on - strand, within DvMF_2992 at 3774.474 kb on - strand, within DvMF_2992 at 3774.686 kb on + strand, within DvMF_2992 at 3774.721 kb on + strand, within DvMF_2992 at 3774.780 kb on - strand, within DvMF_2992 at 3774.858 kb on - strand, within DvMF_2992 at 3774.887 kb on - strand, within DvMF_2992 at 3774.924 kb on - strand, within DvMF_2992 at 3774.988 kb on + strand, within DvMF_2992 at 3774.988 kb on + strand, within DvMF_2992 at 3775.036 kb on + strand, within DvMF_2992 at 3775.295 kb on - strand, within DvMF_2992 at 3775.723 kb on - strand, within DvMF_2992 at 3775.812 kb on - strand at 3775.958 kb on + strand at 3776.121 kb on - strand at 3776.298 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 3,772,208 + DvMF_2991 0.29 -1.3 3,772,333 + DvMF_2991 0.39 -0.6 3,772,359 + DvMF_2991 0.41 -2.2 3,772,663 - DvMF_2991 0.67 -3.2 3,772,942 - -0.4 3,773,082 + -1.3 3,773,258 + -0.9 3,773,306 + -1.5 3,773,333 - +1.0 3,773,592 + DvMF_2992 0.13 -3.7 3,773,593 - DvMF_2992 0.14 -1.2 3,773,640 - DvMF_2992 0.15 -0.0 3,773,708 + DvMF_2992 0.17 -0.8 3,773,720 + DvMF_2992 0.18 -1.1 3,774,290 + DvMF_2992 0.38 -0.5 3,774,298 - DvMF_2992 0.38 -0.6 3,774,317 - DvMF_2992 0.39 -1.7 3,774,474 - DvMF_2992 0.44 -2.9 3,774,686 + DvMF_2992 0.51 -1.0 3,774,721 + DvMF_2992 0.52 -2.2 3,774,780 - DvMF_2992 0.55 -1.1 3,774,858 - DvMF_2992 0.57 -2.7 3,774,887 - DvMF_2992 0.58 -0.2 3,774,924 - DvMF_2992 0.59 -4.4 3,774,988 + DvMF_2992 0.62 +1.0 3,774,988 + DvMF_2992 0.62 +1.3 3,775,036 + DvMF_2992 0.63 -0.7 3,775,295 - DvMF_2992 0.72 -0.6 3,775,723 - DvMF_2992 0.87 -1.5 3,775,812 - -0.3 3,775,958 + +0.1 3,776,121 - -0.4 3,776,298 + -0.9
Or see this region's nucleotide sequence