Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2793 and DvMF_2794 are separated by 355 nucleotides DvMF_2794 and DvMF_2795 are separated by 105 nucleotides DvMF_2795 and DvMF_2796 are separated by 528 nucleotides
DvMF_2793: DvMF_2793 - Pirin domain protein (RefSeq), at 3,536,260 to 3,537,198
_2793
DvMF_2794: DvMF_2794 - hypothetical protein (RefSeq), at 3,537,554 to 3,537,877
_2794
DvMF_2795: DvMF_2795 - peptidase M29 aminopeptidase II (RefSeq), at 3,537,983 to 3,539,182
_2795
DvMF_2796: DvMF_2796 - Tetratricopeptide TPR_2 repeat protein (RefSeq), at 3,539,711 to 3,541,453
_2796
Position (kb)
3537
3538
3539
3540 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3536.991 kb on + strand, within DvMF_2793 at 3537.084 kb on + strand, within DvMF_2793 at 3537.310 kb on - strand at 3537.329 kb on + strand at 3537.444 kb on + strand at 3537.452 kb on - strand at 3537.489 kb on - strand at 3537.517 kb on + strand at 3537.530 kb on - strand at 3537.535 kb on - strand at 3537.535 kb on - strand at 3537.559 kb on + strand at 3537.625 kb on + strand, within DvMF_2794 at 3538.238 kb on - strand, within DvMF_2795 at 3538.441 kb on + strand, within DvMF_2795 at 3538.474 kb on + strand, within DvMF_2795 at 3538.551 kb on - strand, within DvMF_2795 at 3538.551 kb on - strand, within DvMF_2795 at 3538.783 kb on + strand, within DvMF_2795 at 3538.794 kb on - strand, within DvMF_2795 at 3538.828 kb on - strand, within DvMF_2795 at 3538.978 kb on - strand, within DvMF_2795 at 3539.490 kb on - strand at 3539.709 kb on + strand at 3539.717 kb on - strand at 3539.717 kb on - strand at 3539.717 kb on - strand at 3539.758 kb on - strand at 3539.931 kb on - strand, within DvMF_2796 at 3540.134 kb on + strand, within DvMF_2796 at 3540.134 kb on + strand, within DvMF_2796
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 3,536,991 + DvMF_2793 0.78 -2.8 3,537,084 + DvMF_2793 0.88 -1.0 3,537,310 - -0.3 3,537,329 + +0.5 3,537,444 + -1.9 3,537,452 - -0.9 3,537,489 - -0.1 3,537,517 + -1.1 3,537,530 - -0.0 3,537,535 - -0.5 3,537,535 - -3.8 3,537,559 + -0.2 3,537,625 + DvMF_2794 0.22 -2.7 3,538,238 - DvMF_2795 0.21 +0.7 3,538,441 + DvMF_2795 0.38 -1.0 3,538,474 + DvMF_2795 0.41 -0.3 3,538,551 - DvMF_2795 0.47 -0.2 3,538,551 - DvMF_2795 0.47 -1.6 3,538,783 + DvMF_2795 0.67 -0.0 3,538,794 - DvMF_2795 0.68 -1.1 3,538,828 - DvMF_2795 0.70 -0.2 3,538,978 - DvMF_2795 0.83 +1.5 3,539,490 - -2.1 3,539,709 + -1.2 3,539,717 - -1.4 3,539,717 - -1.0 3,539,717 - -2.1 3,539,758 - -0.9 3,539,931 - DvMF_2796 0.13 -0.5 3,540,134 + DvMF_2796 0.24 -0.8 3,540,134 + DvMF_2796 0.24 -0.4
Or see this region's nucleotide sequence