Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2660 and DvMF_2661 are separated by 207 nucleotides DvMF_2661 and DvMF_2662 are separated by 331 nucleotides
DvMF_2660: DvMF_2660 - Fe-S cluster assembly protein NifU (RefSeq), at 3,359,874 to 3,360,719
_2660
DvMF_2661: DvMF_2661 - metal dependent phosphohydrolase (RefSeq), at 3,360,927 to 3,361,910
_2661
DvMF_2662: DvMF_2662 - metal dependent phosphohydrolase (RefSeq), at 3,362,242 to 3,363,258
_2662
Position (kb)
3360
3361
3362 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 3359.941 kb on - strand at 3359.948 kb on - strand at 3360.162 kb on + strand, within DvMF_2660 at 3360.165 kb on - strand, within DvMF_2660 at 3360.475 kb on - strand, within DvMF_2660 at 3360.493 kb on + strand, within DvMF_2660 at 3360.515 kb on - strand, within DvMF_2660 at 3360.651 kb on - strand at 3360.919 kb on + strand at 3360.924 kb on + strand at 3360.927 kb on - strand at 3361.137 kb on + strand, within DvMF_2661 at 3361.225 kb on + strand, within DvMF_2661 at 3361.360 kb on - strand, within DvMF_2661 at 3361.360 kb on - strand, within DvMF_2661 at 3361.600 kb on + strand, within DvMF_2661 at 3361.637 kb on - strand, within DvMF_2661 at 3361.881 kb on + strand at 3361.894 kb on + strand at 3361.961 kb on + strand at 3362.079 kb on - strand at 3362.163 kb on + strand at 3362.168 kb on + strand at 3362.289 kb on + strand at 3362.426 kb on + strand, within DvMF_2662 at 3362.427 kb on - strand, within DvMF_2662 at 3362.585 kb on + strand, within DvMF_2662 at 3362.598 kb on - strand, within DvMF_2662 at 3362.653 kb on + strand, within DvMF_2662 at 3362.722 kb on + strand, within DvMF_2662 at 3362.723 kb on + strand, within DvMF_2662 at 3362.723 kb on - strand, within DvMF_2662 at 3362.723 kb on - strand, within DvMF_2662 at 3362.741 kb on + strand, within DvMF_2662 at 3362.749 kb on - strand, within DvMF_2662 at 3362.776 kb on - strand, within DvMF_2662
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 3,359,941 - -0.1 3,359,948 - -4.5 3,360,162 + DvMF_2660 0.34 -0.7 3,360,165 - DvMF_2660 0.34 -0.3 3,360,475 - DvMF_2660 0.71 -0.5 3,360,493 + DvMF_2660 0.73 -0.4 3,360,515 - DvMF_2660 0.76 -0.9 3,360,651 - -2.7 3,360,919 + -0.4 3,360,924 + -0.4 3,360,927 - -0.9 3,361,137 + DvMF_2661 0.21 -3.0 3,361,225 + DvMF_2661 0.30 -2.7 3,361,360 - DvMF_2661 0.44 -2.3 3,361,360 - DvMF_2661 0.44 -2.3 3,361,600 + DvMF_2661 0.68 -0.1 3,361,637 - DvMF_2661 0.72 -6.3 3,361,881 + -1.9 3,361,894 + -1.7 3,361,961 + +1.9 3,362,079 - -0.1 3,362,163 + +0.2 3,362,168 + -3.8 3,362,289 + -1.2 3,362,426 + DvMF_2662 0.18 -0.6 3,362,427 - DvMF_2662 0.18 -1.1 3,362,585 + DvMF_2662 0.34 -1.2 3,362,598 - DvMF_2662 0.35 +1.3 3,362,653 + DvMF_2662 0.40 -1.0 3,362,722 + DvMF_2662 0.47 -1.1 3,362,723 + DvMF_2662 0.47 -1.2 3,362,723 - DvMF_2662 0.47 -0.3 3,362,723 - DvMF_2662 0.47 -0.8 3,362,741 + DvMF_2662 0.49 -1.0 3,362,749 - DvMF_2662 0.50 -0.7 3,362,776 - DvMF_2662 0.53 -0.4
Or see this region's nucleotide sequence