Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2628 and DvMF_2629 are separated by 237 nucleotides DvMF_2629 and DvMF_2630 are separated by 196 nucleotides DvMF_2630 and DvMF_2631 are separated by 11 nucleotides DvMF_2631 and DvMF_2632 are separated by 1 nucleotides
DvMF_2628: DvMF_2628 - hypothetical protein (RefSeq), at 3,319,089 to 3,320,864
_2628
DvMF_2629: DvMF_2629 - Cupin 2 conserved barrel domain protein (RefSeq), at 3,321,102 to 3,321,518
_2629
DvMF_2630: DvMF_2630 - penicillin-binding protein, 1A family (RefSeq), at 3,321,715 to 3,324,138
_2630
DvMF_2631: DvMF_2631 - hypothetical protein (RefSeq), at 3,324,150 to 3,324,980
_2631
DvMF_2632: DvMF_2632 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein (RefSeq), at 3,324,982 to 3,326,772
_2632
Position (kb)
3321
3322
3323
3324
3325 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3320.729 kb on - strand at 3320.884 kb on + strand at 3321.008 kb on - strand at 3321.008 kb on - strand at 3321.018 kb on - strand at 3321.101 kb on - strand at 3321.147 kb on + strand, within DvMF_2629 at 3321.192 kb on - strand, within DvMF_2629 at 3321.256 kb on - strand, within DvMF_2629 at 3321.300 kb on + strand, within DvMF_2629 at 3321.343 kb on - strand, within DvMF_2629 at 3321.402 kb on + strand, within DvMF_2629 at 3321.548 kb on + strand at 3321.713 kb on + strand at 3324.258 kb on - strand, within DvMF_2631 at 3324.305 kb on + strand, within DvMF_2631 at 3324.354 kb on - strand, within DvMF_2631 at 3324.750 kb on + strand, within DvMF_2631 at 3324.780 kb on + strand, within DvMF_2631 at 3324.806 kb on + strand, within DvMF_2631 at 3324.812 kb on + strand, within DvMF_2631 at 3324.834 kb on + strand, within DvMF_2631
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 3,320,729 - -1.2 3,320,884 + -2.2 3,321,008 - -1.9 3,321,008 - -0.3 3,321,018 - -0.8 3,321,101 - -0.3 3,321,147 + DvMF_2629 0.11 -1.1 3,321,192 - DvMF_2629 0.22 +0.4 3,321,256 - DvMF_2629 0.37 -1.0 3,321,300 + DvMF_2629 0.47 -0.7 3,321,343 - DvMF_2629 0.58 +2.3 3,321,402 + DvMF_2629 0.72 -1.6 3,321,548 + -0.4 3,321,713 + -1.3 3,324,258 - DvMF_2631 0.13 -1.0 3,324,305 + DvMF_2631 0.19 -1.2 3,324,354 - DvMF_2631 0.25 -1.5 3,324,750 + DvMF_2631 0.72 -0.7 3,324,780 + DvMF_2631 0.76 -1.7 3,324,806 + DvMF_2631 0.79 -0.8 3,324,812 + DvMF_2631 0.80 -1.7 3,324,834 + DvMF_2631 0.82 -0.3
Or see this region's nucleotide sequence