Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2628
Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,318,138 | + | -1.4 | |||
3,318,150 | + | -0.7 | |||
3,318,654 | + | DvMF_2627 | 0.65 | -0.3 | |
3,318,662 | - | DvMF_2627 | 0.66 | +0.0 | |
3,318,760 | + | DvMF_2627 | 0.84 | -0.4 | |
3,318,821 | + | -2.2 | |||
3,319,136 | - | -2.2 | |||
3,319,390 | - | DvMF_2628 | 0.17 | +0.5 | |
3,319,658 | + | DvMF_2628 | 0.32 | -1.9 | |
3,319,991 | + | DvMF_2628 | 0.51 | -0.7 | |
3,319,991 | + | DvMF_2628 | 0.51 | -1.3 | |
3,319,991 | + | DvMF_2628 | 0.51 | -2.0 | |
3,319,991 | + | DvMF_2628 | 0.51 | -0.4 | |
3,319,999 | + | DvMF_2628 | 0.51 | -0.7 | |
3,320,285 | - | DvMF_2628 | 0.67 | -1.1 | |
3,320,412 | - | DvMF_2628 | 0.74 | -1.2 | |
3,320,644 | + | DvMF_2628 | 0.88 | -0.9 | |
3,320,729 | - | -1.2 | |||
3,320,884 | + | -2.2 | |||
3,321,008 | - | -1.9 | |||
3,321,008 | - | -0.3 | |||
3,321,018 | - | -0.8 | |||
3,321,101 | - | -0.3 | |||
3,321,147 | + | DvMF_2629 | 0.11 | -1.1 | |
3,321,192 | - | DvMF_2629 | 0.22 | +0.4 | |
3,321,256 | - | DvMF_2629 | 0.37 | -1.0 | |
3,321,300 | + | DvMF_2629 | 0.47 | -0.7 | |
3,321,343 | - | DvMF_2629 | 0.58 | +2.3 | |
3,321,402 | + | DvMF_2629 | 0.72 | -1.6 | |
3,321,548 | + | -0.4 | |||
3,321,713 | + | -1.3 |
Or see this region's nucleotide sequence