Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2505
Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,158,099 | + | DvMF_2504 | 0.30 | -4.2 | |
3,158,280 | - | DvMF_2504 | 0.48 | -1.8 | |
3,158,350 | + | DvMF_2504 | 0.55 | -4.1 | |
3,158,358 | - | DvMF_2504 | 0.56 | -3.7 | |
3,158,358 | - | DvMF_2504 | 0.56 | -0.9 | |
3,158,394 | + | DvMF_2504 | 0.59 | -1.9 | |
3,158,435 | + | DvMF_2504 | 0.63 | -4.7 | |
3,158,499 | + | DvMF_2504 | 0.70 | -1.5 | |
3,158,656 | + | DvMF_2504 | 0.86 | -4.4 | |
3,158,667 | + | DvMF_2504 | 0.87 | -1.0 | |
3,158,708 | + | -1.8 | |||
3,158,720 | + | -0.9 | |||
3,158,792 | + | -0.0 | |||
3,158,855 | + | -0.7 | |||
3,158,873 | - | -2.3 | |||
3,158,998 | + | DvMF_2505 | 0.34 | -3.6 | |
3,159,125 | + | DvMF_2505 | 0.66 | -1.6 | |
3,159,139 | + | DvMF_2505 | 0.70 | -1.2 | |
3,159,139 | + | DvMF_2505 | 0.70 | -0.2 | |
3,159,144 | + | DvMF_2505 | 0.71 | -0.9 | |
3,159,265 | + | -1.6 | |||
3,159,310 | + | +0.1 | |||
3,159,363 | + | -0.3 | |||
3,159,450 | + | -2.9 | |||
3,159,547 | - | -0.1 | |||
3,159,715 | + | -2.9 | |||
3,159,744 | + | -0.7 | |||
3,159,991 | + | DvMF_2506 | 0.15 | -2.1 | |
3,160,017 | - | DvMF_2506 | 0.16 | -1.2 |
Or see this region's nucleotide sequence