Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2389
Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,019,218 | - | DvMF_2388 | 0.77 | -2.6 | |
3,019,233 | - | DvMF_2388 | 0.78 | +0.6 | |
3,019,311 | - | DvMF_2388 | 0.83 | -0.8 | |
3,019,495 | - | -0.4 | |||
3,019,497 | + | -0.3 | |||
3,020,083 | + | -0.8 | |||
3,020,093 | - | -0.7 | |||
3,020,158 | - | -1.2 | |||
3,020,227 | + | DvMF_2389 | 0.12 | +1.6 | |
3,020,257 | + | DvMF_2389 | 0.13 | -1.2 | |
3,020,296 | + | DvMF_2389 | 0.15 | -0.1 | |
3,020,296 | + | DvMF_2389 | 0.15 | -3.0 | |
3,020,304 | - | DvMF_2389 | 0.15 | +0.3 | |
3,020,448 | - | DvMF_2389 | 0.21 | -3.3 | |
3,020,568 | + | DvMF_2389 | 0.26 | +0.2 | |
3,020,827 | - | DvMF_2389 | 0.38 | +0.1 | |
3,021,039 | + | DvMF_2389 | 0.47 | -0.2 | |
3,021,380 | + | DvMF_2389 | 0.61 | -0.3 | |
3,021,408 | - | DvMF_2389 | 0.62 | -0.8 | |
3,021,605 | + | DvMF_2389 | 0.71 | -1.1 | |
3,021,727 | + | DvMF_2389 | 0.76 | -0.8 | |
3,021,730 | - | DvMF_2389 | 0.76 | +0.8 | |
3,021,868 | - | DvMF_2389 | 0.82 | -0.1 | |
3,022,527 | + | -1.2 | |||
3,022,527 | + | -4.3 | |||
3,022,527 | + | -4.4 | |||
3,022,535 | - | -2.1 | |||
3,022,535 | - | +1.2 | |||
3,022,600 | + | DvMF_2390 | 0.11 | +0.9 | |
3,022,856 | + | DvMF_2390 | 0.26 | -0.4 | |
3,022,958 | + | DvMF_2390 | 0.32 | +0.3 | |
3,023,145 | - | DvMF_2390 | 0.43 | +0.7 | |
3,023,149 | + | DvMF_2390 | 0.43 | -0.4 |
Or see this region's nucleotide sequence