Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2316 and DvMF_2317 are separated by 42 nucleotides DvMF_2317 and DvMF_2318 overlap by 10 nucleotides DvMF_2318 and DvMF_2319 are separated by 398 nucleotides
DvMF_2316: DvMF_2316 - glutamine amidotransferase class-I (RefSeq), at 2,915,383 to 2,916,225
_2316
DvMF_2317: DvMF_2317 - protein of unknown function DUF152 (RefSeq), at 2,916,268 to 2,917,101
_2317
DvMF_2318: DvMF_2318 - 5-formyltetrahydrofolate cyclo-ligase (RefSeq), at 2,917,092 to 2,917,796
_2318
DvMF_2319: DvMF_2319 - phosphoesterase, Icc protein-like protein (RefSeq), at 2,918,195 to 2,918,872
_2319
Position (kb)
2917
2918 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2916.237 kb on - strand at 2916.255 kb on + strand at 2916.360 kb on + strand, within DvMF_2317 at 2916.469 kb on + strand, within DvMF_2317 at 2916.516 kb on + strand, within DvMF_2317 at 2916.522 kb on + strand, within DvMF_2317 at 2916.522 kb on + strand, within DvMF_2317 at 2916.524 kb on - strand, within DvMF_2317 at 2916.530 kb on - strand, within DvMF_2317 at 2916.555 kb on + strand, within DvMF_2317 at 2916.705 kb on + strand, within DvMF_2317 at 2916.793 kb on - strand, within DvMF_2317 at 2916.859 kb on + strand, within DvMF_2317 at 2916.979 kb on - strand, within DvMF_2317 at 2917.098 kb on - strand at 2917.301 kb on + strand, within DvMF_2318 at 2917.375 kb on + strand, within DvMF_2318 at 2917.390 kb on + strand, within DvMF_2318 at 2917.749 kb on + strand at 2918.411 kb on - strand, within DvMF_2319 at 2918.411 kb on - strand, within DvMF_2319 at 2918.483 kb on - strand, within DvMF_2319 at 2918.513 kb on - strand, within DvMF_2319 at 2918.650 kb on + strand, within DvMF_2319 at 2918.722 kb on + strand, within DvMF_2319 at 2918.757 kb on + strand, within DvMF_2319
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 2,916,237 - -0.5 2,916,255 + -0.5 2,916,360 + DvMF_2317 0.11 -0.7 2,916,469 + DvMF_2317 0.24 -1.7 2,916,516 + DvMF_2317 0.30 -0.5 2,916,522 + DvMF_2317 0.30 -0.5 2,916,522 + DvMF_2317 0.30 -3.9 2,916,524 - DvMF_2317 0.31 -1.0 2,916,530 - DvMF_2317 0.31 -0.4 2,916,555 + DvMF_2317 0.34 +0.0 2,916,705 + DvMF_2317 0.52 -1.9 2,916,793 - DvMF_2317 0.63 +0.3 2,916,859 + DvMF_2317 0.71 -0.7 2,916,979 - DvMF_2317 0.85 -1.0 2,917,098 - -0.3 2,917,301 + DvMF_2318 0.30 -2.1 2,917,375 + DvMF_2318 0.40 -1.2 2,917,390 + DvMF_2318 0.42 -3.6 2,917,749 + -0.1 2,918,411 - DvMF_2319 0.32 +0.3 2,918,411 - DvMF_2319 0.32 -3.3 2,918,483 - DvMF_2319 0.42 -1.3 2,918,513 - DvMF_2319 0.47 +1.1 2,918,650 + DvMF_2319 0.67 -1.4 2,918,722 + DvMF_2319 0.78 +0.2 2,918,757 + DvMF_2319 0.83 -0.6
Or see this region's nucleotide sequence