Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2197
Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,745,431 | + | DvMF_2196 | 0.81 | -1.3 | |
2,745,431 | + | DvMF_2196 | 0.81 | -0.2 | |
2,745,439 | - | DvMF_2196 | 0.81 | -0.5 | |
2,745,439 | - | DvMF_2196 | 0.81 | +0.3 | |
2,745,478 | + | DvMF_2196 | 0.83 | +0.5 | |
2,745,486 | - | DvMF_2196 | 0.83 | -1.6 | |
2,745,571 | - | DvMF_2196 | 0.86 | -1.0 | |
2,746,105 | + | -1.7 | |||
2,746,110 | + | +0.2 | |||
2,746,113 | - | -0.6 | |||
2,746,118 | - | -1.0 | |||
2,746,271 | - | -1.0 | |||
2,746,416 | + | +0.0 | |||
2,746,434 | + | -2.1 | |||
2,746,519 | + | -1.0 | |||
2,746,885 | + | DvMF_2197 | 0.45 | -0.8 | |
2,747,023 | + | DvMF_2197 | 0.58 | -0.9 | |
2,747,109 | - | DvMF_2197 | 0.66 | +0.5 | |
2,747,543 | - | -4.3 | |||
2,747,582 | + | -1.2 | |||
2,747,886 | - | -2.0 | |||
2,747,902 | + | -1.9 | |||
2,747,923 | - | -1.0 | |||
2,747,986 | + | -1.3 | |||
2,748,268 | - | DvMF_2198 | 0.18 | -0.3 | |
2,748,279 | - | DvMF_2198 | 0.18 | +1.4 | |
2,748,325 | - | DvMF_2198 | 0.19 | -1.3 |
Or see this region's nucleotide sequence