Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2027 and DvMF_2028 are separated by 228 nucleotides DvMF_2028 and DvMF_2029 are separated by 302 nucleotides DvMF_2029 and DvMF_2030 are separated by 265 nucleotides
DvMF_2027: DvMF_2027 - inositol monophosphatase (RefSeq), at 2,512,017 to 2,512,979
_2027
DvMF_2028: DvMF_2028 - NLP/P60 protein (RefSeq), at 2,513,208 to 2,513,909
_2028
DvMF_2029: DvMF_2029 - histone family protein DNA-binding protein (RefSeq), at 2,514,212 to 2,514,499
_2029
DvMF_2030: DvMF_2030 - MerR family transcriptional regulator (RefSeq), at 2,514,765 to 2,515,484
_2030
Position (kb)
2513
2514 Strain fitness (log2 ratio)
-2
-1
0
1 at 2512.438 kb on + strand, within DvMF_2027 at 2512.565 kb on + strand, within DvMF_2027 at 2512.741 kb on - strand, within DvMF_2027 at 2512.896 kb on + strand at 2512.950 kb on + strand at 2512.950 kb on - strand at 2512.952 kb on + strand at 2513.160 kb on - strand at 2513.247 kb on + strand at 2513.337 kb on + strand, within DvMF_2028 at 2513.405 kb on - strand, within DvMF_2028 at 2513.552 kb on + strand, within DvMF_2028 at 2513.580 kb on + strand, within DvMF_2028 at 2513.590 kb on + strand, within DvMF_2028 at 2513.634 kb on - strand, within DvMF_2028 at 2513.699 kb on - strand, within DvMF_2028 at 2513.747 kb on + strand, within DvMF_2028 at 2513.755 kb on - strand, within DvMF_2028 at 2513.788 kb on + strand, within DvMF_2028 at 2513.903 kb on + strand at 2514.048 kb on - strand at 2514.050 kb on + strand at 2514.187 kb on - strand at 2514.558 kb on + strand at 2514.697 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 2,512,438 + DvMF_2027 0.44 -0.3 2,512,565 + DvMF_2027 0.57 -0.7 2,512,741 - DvMF_2027 0.75 +0.1 2,512,896 + -2.0 2,512,950 + -0.3 2,512,950 - -0.5 2,512,952 + +1.6 2,513,160 - -0.7 2,513,247 + +0.3 2,513,337 + DvMF_2028 0.18 -0.5 2,513,405 - DvMF_2028 0.28 -0.9 2,513,552 + DvMF_2028 0.49 -0.3 2,513,580 + DvMF_2028 0.53 +0.1 2,513,590 + DvMF_2028 0.54 -0.8 2,513,634 - DvMF_2028 0.61 -0.4 2,513,699 - DvMF_2028 0.70 -0.3 2,513,747 + DvMF_2028 0.77 +0.2 2,513,755 - DvMF_2028 0.78 +0.1 2,513,788 + DvMF_2028 0.83 -0.2 2,513,903 + -0.3 2,514,048 - -0.6 2,514,050 + -0.6 2,514,187 - -0.9 2,514,558 + -1.0 2,514,697 + -0.3
Or see this region's nucleotide sequence