Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1742
Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,128,583 | - | DvMF_1741 | 0.21 | -3.1 | |
2,128,616 | - | DvMF_1741 | 0.24 | -3.2 | |
2,128,646 | + | DvMF_1741 | 0.26 | -1.8 | |
2,128,703 | - | DvMF_1741 | 0.31 | -1.1 | |
2,128,726 | + | DvMF_1741 | 0.33 | -4.4 | |
2,128,951 | - | DvMF_1741 | 0.52 | -2.5 | |
2,128,973 | - | DvMF_1741 | 0.54 | -4.9 | |
2,129,072 | + | DvMF_1741 | 0.62 | -2.1 | |
2,129,092 | + | DvMF_1741 | 0.64 | -1.7 | |
2,129,248 | + | DvMF_1741 | 0.77 | -1.7 | |
2,129,251 | - | DvMF_1741 | 0.77 | -0.8 | |
2,129,335 | + | DvMF_1741 | 0.84 | -2.3 | |
2,129,368 | + | DvMF_1741 | 0.87 | -0.1 | |
2,129,528 | - | -1.2 | |||
2,129,646 | + | DvMF_1742 | 0.13 | -4.6 | |
2,129,666 | + | DvMF_1742 | 0.16 | -4.8 | |
2,129,865 | + | DvMF_1742 | 0.45 | -5.6 | |
2,130,138 | + | DvMF_1742 | 0.86 | -5.0 | |
2,130,178 | + | +0.3 | |||
2,130,405 | - | DvMF_1743 | 0.18 | -0.5 | |
2,130,452 | - | DvMF_1743 | 0.23 | -2.5 | |
2,130,675 | + | DvMF_1743 | 0.46 | -3.5 | |
2,130,840 | + | DvMF_1743 | 0.63 | -4.9 | |
2,130,892 | + | DvMF_1743 | 0.68 | -0.4 | |
2,130,909 | + | DvMF_1743 | 0.70 | -4.5 | |
2,131,049 | + | DvMF_1743 | 0.85 | -2.2 |
Or see this region's nucleotide sequence