Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1658 and DvMF_1659 overlap by 8 nucleotides DvMF_1659 and DvMF_1660 are separated by 72 nucleotides DvMF_1660 and DvMF_1661 are separated by 525 nucleotides DvMF_1661 and DvMF_1662 overlap by 19 nucleotides
DvMF_1658: DvMF_1658 - Terminase (RefSeq), at 2,034,968 to 2,036,665
_1658
DvMF_1659: DvMF_1659 - putative phage terminase, small subunit, P27 family (RefSeq), at 2,036,658 to 2,037,131
_1659
DvMF_1660: DvMF_1660 - HNH endonuclease (RefSeq), at 2,037,204 to 2,037,599
_1660
DvMF_1661: DvMF_1661 - hypothetical protein (RefSeq), at 2,038,125 to 2,038,472
_1661
DvMF_1662: DvMF_1662 - hypothetical protein (RefSeq), at 2,038,454 to 2,038,684
_1662
Position (kb)
2037
2038 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2036.413 kb on + strand, within DvMF_1658 at 2036.572 kb on - strand at 2036.635 kb on - strand at 2036.803 kb on + strand, within DvMF_1659 at 2036.821 kb on + strand, within DvMF_1659 at 2036.821 kb on + strand, within DvMF_1659 at 2036.976 kb on - strand, within DvMF_1659 at 2036.976 kb on - strand, within DvMF_1659 at 2037.100 kb on - strand at 2037.201 kb on + strand at 2037.254 kb on - strand, within DvMF_1660 at 2037.285 kb on - strand, within DvMF_1660 at 2037.526 kb on - strand, within DvMF_1660 at 2037.600 kb on - strand at 2037.772 kb on + strand at 2037.775 kb on - strand at 2037.780 kb on - strand at 2037.780 kb on - strand at 2037.825 kb on - strand at 2037.879 kb on - strand at 2038.111 kb on - strand at 2038.165 kb on + strand, within DvMF_1661 at 2038.394 kb on - strand, within DvMF_1661 at 2038.459 kb on - strand at 2038.505 kb on + strand, within DvMF_1662 at 2038.523 kb on - strand, within DvMF_1662 at 2038.551 kb on - strand, within DvMF_1662
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 2,036,413 + DvMF_1658 0.85 +0.6 2,036,572 - -1.1 2,036,635 - +0.2 2,036,803 + DvMF_1659 0.31 -5.3 2,036,821 + DvMF_1659 0.34 -2.8 2,036,821 + DvMF_1659 0.34 -0.6 2,036,976 - DvMF_1659 0.67 -1.3 2,036,976 - DvMF_1659 0.67 -0.7 2,037,100 - +1.0 2,037,201 + -0.3 2,037,254 - DvMF_1660 0.13 -1.4 2,037,285 - DvMF_1660 0.20 -3.7 2,037,526 - DvMF_1660 0.81 -1.4 2,037,600 - -0.5 2,037,772 + -0.4 2,037,775 - +0.6 2,037,780 - -1.4 2,037,780 - -0.5 2,037,825 - -1.1 2,037,879 - -3.2 2,038,111 - +0.1 2,038,165 + DvMF_1661 0.11 -0.1 2,038,394 - DvMF_1661 0.77 -4.0 2,038,459 - -1.5 2,038,505 + DvMF_1662 0.22 -0.2 2,038,523 - DvMF_1662 0.30 +0.4 2,038,551 - DvMF_1662 0.42 -0.2
Or see this region's nucleotide sequence