Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1604 and DvMF_1605 overlap by 4 nucleotides DvMF_1605 and DvMF_1606 are separated by 223 nucleotides
DvMF_1604: DvMF_1604 - proton-translocating NADH-quinone oxidoreductase, chain M (RefSeq), at 1,974,962 to 1,976,521
_1604
DvMF_1605: DvMF_1605 - NADH dehydrogenase (quinone) (RefSeq), at 1,976,518 to 1,977,945
_1605
DvMF_1606: DvMF_1606 - hypothetical protein (RefSeq), at 1,978,169 to 1,979,344
_1606
Position (kb)
1976
1977
1978 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1975.602 kb on - strand, within DvMF_1604 at 1975.895 kb on - strand, within DvMF_1604 at 1976.143 kb on - strand, within DvMF_1604 at 1976.528 kb on + strand at 1976.546 kb on - strand at 1976.620 kb on + strand at 1976.735 kb on + strand, within DvMF_1605 at 1976.775 kb on + strand, within DvMF_1605 at 1976.925 kb on - strand, within DvMF_1605 at 1977.188 kb on + strand, within DvMF_1605 at 1977.421 kb on + strand, within DvMF_1605 at 1977.436 kb on + strand, within DvMF_1605 at 1977.454 kb on + strand, within DvMF_1605 at 1977.489 kb on + strand, within DvMF_1605 at 1977.562 kb on - strand, within DvMF_1605 at 1977.634 kb on - strand, within DvMF_1605 at 1977.730 kb on + strand, within DvMF_1605 at 1977.730 kb on + strand, within DvMF_1605 at 1977.730 kb on + strand, within DvMF_1605 at 1977.733 kb on - strand, within DvMF_1605 at 1977.738 kb on - strand, within DvMF_1605 at 1977.738 kb on - strand, within DvMF_1605 at 1977.738 kb on - strand, within DvMF_1605 at 1978.318 kb on - strand, within DvMF_1606 at 1978.530 kb on + strand, within DvMF_1606 at 1978.546 kb on - strand, within DvMF_1606 at 1978.574 kb on - strand, within DvMF_1606 at 1978.811 kb on - strand, within DvMF_1606 at 1978.895 kb on + strand, within DvMF_1606 at 1978.929 kb on - strand, within DvMF_1606
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 1,975,602 - DvMF_1604 0.41 +1.0 1,975,895 - DvMF_1604 0.60 -0.2 1,976,143 - DvMF_1604 0.76 -0.8 1,976,528 + -1.1 1,976,546 - +1.8 1,976,620 + -0.4 1,976,735 + DvMF_1605 0.15 -2.1 1,976,775 + DvMF_1605 0.18 -0.0 1,976,925 - DvMF_1605 0.29 -1.0 1,977,188 + DvMF_1605 0.47 +0.0 1,977,421 + DvMF_1605 0.63 -0.0 1,977,436 + DvMF_1605 0.64 -0.6 1,977,454 + DvMF_1605 0.66 -1.3 1,977,489 + DvMF_1605 0.68 +0.0 1,977,562 - DvMF_1605 0.73 -2.1 1,977,634 - DvMF_1605 0.78 -0.6 1,977,730 + DvMF_1605 0.85 -0.0 1,977,730 + DvMF_1605 0.85 +0.6 1,977,730 + DvMF_1605 0.85 -0.6 1,977,733 - DvMF_1605 0.85 -0.9 1,977,738 - DvMF_1605 0.85 -2.5 1,977,738 - DvMF_1605 0.85 -1.3 1,977,738 - DvMF_1605 0.85 -0.9 1,978,318 - DvMF_1606 0.13 -0.7 1,978,530 + DvMF_1606 0.31 +0.4 1,978,546 - DvMF_1606 0.32 -0.5 1,978,574 - DvMF_1606 0.34 +0.2 1,978,811 - DvMF_1606 0.55 -0.1 1,978,895 + DvMF_1606 0.62 -1.8 1,978,929 - DvMF_1606 0.65 -1.0
Or see this region's nucleotide sequence