Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1324 and DvMF_1325 are separated by 207 nucleotides DvMF_1325 and DvMF_1326 are separated by 236 nucleotides
DvMF_1324: DvMF_1324 - sigma54 specific transcriptional regulator, Fis family (RefSeq), at 1,616,435 to 1,617,487
_1324
DvMF_1325: DvMF_1325 - TPR repeat-containing protein (RefSeq), at 1,617,695 to 1,621,063
_1325
DvMF_1326: DvMF_1326 - protein of unknown function DUF52 (RefSeq), at 1,621,300 to 1,622,148
_1326
Position (kb)
1617
1618
1619
1620
1621
1622 Strain fitness (log2 ratio)
-2
-1
0
1 at 1616.718 kb on + strand, within DvMF_1324 at 1616.951 kb on + strand, within DvMF_1324 at 1616.959 kb on - strand, within DvMF_1324 at 1616.960 kb on - strand, within DvMF_1324 at 1617.376 kb on + strand, within DvMF_1324 at 1618.103 kb on + strand, within DvMF_1325 at 1618.280 kb on - strand, within DvMF_1325 at 1618.294 kb on - strand, within DvMF_1325 at 1618.581 kb on - strand, within DvMF_1325 at 1618.795 kb on + strand, within DvMF_1325 at 1618.855 kb on + strand, within DvMF_1325 at 1618.875 kb on - strand, within DvMF_1325 at 1619.059 kb on + strand, within DvMF_1325 at 1619.115 kb on - strand, within DvMF_1325 at 1619.206 kb on + strand, within DvMF_1325 at 1619.311 kb on + strand, within DvMF_1325 at 1619.392 kb on + strand, within DvMF_1325 at 1619.499 kb on - strand, within DvMF_1325 at 1619.646 kb on - strand, within DvMF_1325 at 1619.843 kb on - strand, within DvMF_1325 at 1619.987 kb on + strand, within DvMF_1325 at 1619.992 kb on + strand, within DvMF_1325 at 1620.048 kb on + strand, within DvMF_1325 at 1620.124 kb on + strand, within DvMF_1325 at 1620.380 kb on - strand, within DvMF_1325 at 1620.551 kb on - strand, within DvMF_1325 at 1620.661 kb on - strand, within DvMF_1325 at 1620.886 kb on - strand at 1621.011 kb on + strand at 1621.065 kb on - strand at 1621.208 kb on + strand at 1621.271 kb on - strand at 1621.444 kb on - strand, within DvMF_1326 at 1621.510 kb on - strand, within DvMF_1326 at 1621.539 kb on + strand, within DvMF_1326 at 1621.547 kb on - strand, within DvMF_1326 at 1621.706 kb on + strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.750 kb on - strand, within DvMF_1326 at 1621.785 kb on + strand, within DvMF_1326 at 1621.835 kb on + strand, within DvMF_1326 at 1621.958 kb on - strand, within DvMF_1326 at 1622.028 kb on + strand, within DvMF_1326
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 1,616,718 + DvMF_1324 0.27 -1.3 1,616,951 + DvMF_1324 0.49 -0.5 1,616,959 - DvMF_1324 0.50 -0.7 1,616,960 - DvMF_1324 0.50 +1.3 1,617,376 + DvMF_1324 0.89 -0.6 1,618,103 + DvMF_1325 0.12 -0.8 1,618,280 - DvMF_1325 0.17 +0.2 1,618,294 - DvMF_1325 0.18 -0.5 1,618,581 - DvMF_1325 0.26 +0.1 1,618,795 + DvMF_1325 0.33 -0.4 1,618,855 + DvMF_1325 0.34 -0.6 1,618,875 - DvMF_1325 0.35 -0.3 1,619,059 + DvMF_1325 0.40 -0.2 1,619,115 - DvMF_1325 0.42 -1.4 1,619,206 + DvMF_1325 0.45 -0.6 1,619,311 + DvMF_1325 0.48 -0.3 1,619,392 + DvMF_1325 0.50 -0.2 1,619,499 - DvMF_1325 0.54 -0.2 1,619,646 - DvMF_1325 0.58 -0.2 1,619,843 - DvMF_1325 0.64 -0.1 1,619,987 + DvMF_1325 0.68 -0.5 1,619,992 + DvMF_1325 0.68 +0.4 1,620,048 + DvMF_1325 0.70 +0.0 1,620,124 + DvMF_1325 0.72 -0.5 1,620,380 - DvMF_1325 0.80 +0.7 1,620,551 - DvMF_1325 0.85 -0.5 1,620,661 - DvMF_1325 0.88 +0.3 1,620,886 - -0.6 1,621,011 + -1.4 1,621,065 - -1.4 1,621,208 + -1.1 1,621,271 - +0.6 1,621,444 - DvMF_1326 0.17 -0.2 1,621,510 - DvMF_1326 0.25 -1.3 1,621,539 + DvMF_1326 0.28 +0.6 1,621,547 - DvMF_1326 0.29 +0.1 1,621,706 + DvMF_1326 0.48 +0.9 1,621,714 - DvMF_1326 0.49 -0.3 1,621,714 - DvMF_1326 0.49 -2.6 1,621,714 - DvMF_1326 0.49 -1.9 1,621,750 - DvMF_1326 0.53 -2.2 1,621,785 + DvMF_1326 0.57 -1.7 1,621,835 + DvMF_1326 0.63 -1.9 1,621,958 - DvMF_1326 0.78 +0.3 1,622,028 + DvMF_1326 0.86 -1.1
Or see this region's nucleotide sequence