Experiment: MoLS4 with D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0334 and DvMF_0335 are separated by 339 nucleotides DvMF_0335 and DvMF_0336 are separated by 165 nucleotides DvMF_0336 and DvMF_0337 are separated by 833 nucleotides
DvMF_0334: DvMF_0334 - Glutamate--tRNA ligase (RefSeq), at 390,542 to 391,663
_0334
DvMF_0335: DvMF_0335 - hypothetical protein (RefSeq), at 392,003 to 392,395
_0335
DvMF_0336: DvMF_0336 - transcriptional regulator, TetR family (RefSeq), at 392,561 to 393,136
_0336
DvMF_0337: DvMF_0337 - phospholipid/glycerol acyltransferase (RefSeq), at 393,970 to 394,812
_0337
Position (kb)
392
393
394 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 391.565 kb on - strand at 391.728 kb on + strand at 391.845 kb on + strand at 391.880 kb on - strand at 392.105 kb on + strand, within DvMF_0335 at 392.261 kb on + strand, within DvMF_0335 at 392.294 kb on + strand, within DvMF_0335 at 392.910 kb on + strand, within DvMF_0336 at 392.970 kb on - strand, within DvMF_0336 at 393.224 kb on - strand at 393.298 kb on + strand at 393.406 kb on + strand at 393.406 kb on + strand at 393.660 kb on + strand at 393.752 kb on + strand at 393.936 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.125 mg/ml remove 391,565 - -0.8 391,728 + -0.6 391,845 + -0.2 391,880 - -0.2 392,105 + DvMF_0335 0.26 -0.8 392,261 + DvMF_0335 0.66 -0.6 392,294 + DvMF_0335 0.74 -1.0 392,910 + DvMF_0336 0.61 -1.0 392,970 - DvMF_0336 0.71 -1.6 393,224 - -1.0 393,298 + -1.1 393,406 + -0.1 393,406 + -0.8 393,660 + -0.8 393,752 + -0.3 393,936 - -3.4
Or see this region's nucleotide sequence