Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3757

Experiment: Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%
4,876,588	-		BT3755	0.77	+1.0
4,876,588	-		BT3755	0.77	-1.0
4,876,595	-		BT3755	0.78	-0.5
4,876,646	-		BT3755	0.81	+2.0
4,876,737	+		BT3755	0.86	-2.8
4,876,856	+				-0.9
4,876,857	-				+1.4
4,876,859	+				-1.0
4,876,896	-				+0.3
4,876,937	-				-0.6
4,876,937	-				-1.2
4,876,937	-				-0.7
4,876,958	+				-0.1
4,876,958	+				-1.3
4,876,959	-				-1.2
4,876,977	-				-0.9
4,877,047	+		BT3756	0.14	-0.7
4,877,102	+		BT3756	0.24	-1.1
4,877,149	+				-2.1
4,877,355	-		BT3756	0.69	+1.0
4,877,362	-		BT3756	0.70	-0.7
4,877,375	+		BT3756	0.73	+1.0
4,877,375	+		BT3756	0.73	-2.2
4,877,376	-		BT3756	0.73	-0.7
4,877,417	-		BT3756	0.80	-1.0
4,877,430	+		BT3756	0.83	+0.3
4,877,463	+		BT3756	0.89	+1.5
4,877,463	+		BT3756	0.89	-1.3
4,877,473	-				-1.1
4,877,510	+				-1.8
4,877,566	+				-1.3
4,877,643	-		BT3757	0.10	-5.5
4,877,659	+		BT3757	0.12	-3.0
4,877,706	+		BT3757	0.18	-2.8
4,877,737	-		BT3757	0.22	-4.1
4,877,737	-		BT3757	0.22	-5.0
4,877,803	+		BT3757	0.31	-2.6
4,877,816	-		BT3757	0.32	-4.3
4,877,909	+		BT3757	0.44	-4.1
4,878,244	-		BT3757	0.88	-2.9
4,878,244	-		BT3757	0.88	-1.0
4,878,251	+		BT3757	0.89	-3.6
4,878,251	+		BT3757	0.89	-3.6
4,878,296	+				-3.0
4,878,326	+				-6.0
4,878,330	+				+0.0
4,878,358	+				-1.0
4,878,359	-				-2.3
4,878,365	-				-1.6
4,878,383	-				-2.0
4,878,414	-				-0.7
4,878,458	-				+1.0
4,878,476	-				+0.0
4,878,481	-				+0.0
4,878,552	+				+2.0
4,878,553	-				-4.5
4,878,575	+				-4.0
4,878,707	-		BT3758	0.21	-1.0
4,878,806	+		BT3758	0.30	-0.6
4,878,852	+		BT3758	0.34	+1.0
4,879,065	+		BT3758	0.53	-2.4
4,879,089	+		BT3758	0.55	-1.0
4,879,218	-		BT3758	0.66	-3.1
4,879,320	-		BT3758	0.75	-2.1