Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06020 and H281DRAFT_06021 are separated by 88 nucleotides H281DRAFT_06021 and H281DRAFT_06022 are separated by 155 nucleotides
H281DRAFT_06020: H281DRAFT_06020 - carboxymethylenebutenolidase, at 23,790 to 24,662
_06020
H281DRAFT_06021: H281DRAFT_06021 - NADH dehydrogenase, at 24,751 to 26,097
_06021
H281DRAFT_06022: H281DRAFT_06022 - DNA polymerase I, at 26,253 to 28,994
_06022
Position (kb) 24
25
26
27 Strain fitness (log2 ratio) -2
-1
0
1 at 23.860 kb on + strand at 23.861 kb on - strand at 23.906 kb on - strand, within H281DRAFT_06020 at 23.932 kb on - strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.066 kb on - strand, within H281DRAFT_06020 at 24.097 kb on + strand, within H281DRAFT_06020 at 24.355 kb on + strand, within H281DRAFT_06020 at 24.392 kb on + strand, within H281DRAFT_06020 at 24.393 kb on - strand, within H281DRAFT_06020 at 24.428 kb on + strand, within H281DRAFT_06020 at 24.699 kb on + strand at 24.699 kb on + strand at 24.773 kb on - strand at 24.832 kb on + strand at 24.833 kb on - strand at 24.843 kb on + strand at 24.843 kb on + strand at 24.843 kb on + strand at 24.844 kb on - strand at 24.844 kb on - strand at 24.866 kb on + strand at 24.866 kb on + strand at 24.866 kb on + strand at 24.867 kb on - strand at 24.867 kb on - strand at 24.867 kb on - strand at 24.867 kb on - strand at 24.900 kb on + strand, within H281DRAFT_06021 at 25.219 kb on - strand, within H281DRAFT_06021 at 25.754 kb on + strand, within H281DRAFT_06021 at 25.923 kb on + strand, within H281DRAFT_06021 at 26.027 kb on + strand at 26.086 kb on - strand at 26.110 kb on - strand at 26.110 kb on - strand at 26.203 kb on + strand at 26.204 kb on - strand at 26.209 kb on + strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.489 kb on + strand at 26.599 kb on + strand, within H281DRAFT_06022 at 26.600 kb on - strand, within H281DRAFT_06022 at 26.639 kb on - strand, within H281DRAFT_06022 at 26.681 kb on - strand, within H281DRAFT_06022 at 26.681 kb on - strand, within H281DRAFT_06022
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 23,860 + +0.8 23,861 - -1.2 23,906 - H281DRAFT_06020 0.13 -0.1 23,932 - H281DRAFT_06020 0.16 +0.1 24,065 + H281DRAFT_06020 0.32 -0.0 24,065 + H281DRAFT_06020 0.32 +0.9 24,065 + H281DRAFT_06020 0.32 -1.7 24,065 + H281DRAFT_06020 0.32 +0.5 24,066 - H281DRAFT_06020 0.32 -0.5 24,097 + H281DRAFT_06020 0.35 +0.1 24,355 + H281DRAFT_06020 0.65 +0.0 24,392 + H281DRAFT_06020 0.69 -1.1 24,393 - H281DRAFT_06020 0.69 +0.1 24,428 + H281DRAFT_06020 0.73 -1.5 24,699 + +0.7 24,699 + +0.9 24,773 - -0.2 24,832 + +0.2 24,833 - -0.6 24,843 + +0.8 24,843 + -0.4 24,843 + -0.4 24,844 - -0.9 24,844 - -1.2 24,866 + -1.5 24,866 + +0.4 24,866 + -0.4 24,867 - +0.7 24,867 - -0.2 24,867 - +1.0 24,867 - +0.6 24,900 + H281DRAFT_06021 0.11 +0.4 25,219 - H281DRAFT_06021 0.35 -0.1 25,754 + H281DRAFT_06021 0.74 -0.1 25,923 + H281DRAFT_06021 0.87 +0.2 26,027 + -0.2 26,086 - -0.4 26,110 - +0.5 26,110 - +0.8 26,203 + +1.1 26,204 - -0.2 26,209 + -1.0 26,210 - -0.3 26,210 - -1.0 26,210 - +0.2 26,210 - -1.7 26,210 - +0.3 26,210 - -2.7 26,489 + +0.2 26,599 + H281DRAFT_06022 0.13 -2.1 26,600 - H281DRAFT_06022 0.13 -1.9 26,639 - H281DRAFT_06022 0.14 -1.3 26,681 - H281DRAFT_06022 0.16 -2.7 26,681 - H281DRAFT_06022 0.16 -1.9
Or see this region's nucleotide sequence