Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05555 and H281DRAFT_05556 are separated by 250 nucleotides H281DRAFT_05556 and H281DRAFT_05557 are separated by 618 nucleotides
H281DRAFT_05555: H281DRAFT_05555 - transcriptional regulator, MarR family with acetyltransferase activity, at 144,246 to 145,247
_05555
H281DRAFT_05556: H281DRAFT_05556 - 3-oxoacyl-[acyl-carrier protein] reductase, at 145,498 to 146,241
_05556
H281DRAFT_05557: H281DRAFT_05557 - MFS transporter, AAHS family, benzoate transport protein, at 146,860 to 148,236
_05557
Position (kb) 145
146
147 Strain fitness (log2 ratio) -2
-1
0
1
2 at 144.689 kb on - strand, within H281DRAFT_05555 at 144.760 kb on + strand, within H281DRAFT_05555 at 144.763 kb on - strand, within H281DRAFT_05555 at 144.784 kb on - strand at 144.818 kb on - strand, within H281DRAFT_05555 at 145.059 kb on + strand, within H281DRAFT_05555 at 145.060 kb on - strand, within H281DRAFT_05555 at 145.371 kb on - strand at 145.425 kb on + strand at 145.425 kb on + strand at 145.426 kb on - strand at 145.440 kb on - strand at 145.440 kb on - strand at 145.440 kb on - strand at 145.440 kb on - strand at 145.477 kb on - strand at 145.517 kb on - strand at 145.517 kb on - strand at 145.550 kb on - strand at 145.551 kb on + strand at 145.551 kb on + strand at 145.750 kb on + strand at 145.751 kb on - strand, within H281DRAFT_05556 at 145.751 kb on - strand, within H281DRAFT_05556 at 145.827 kb on + strand, within H281DRAFT_05556 at 145.828 kb on - strand, within H281DRAFT_05556 at 146.119 kb on - strand, within H281DRAFT_05556 at 146.553 kb on - strand at 146.607 kb on + strand at 146.776 kb on - strand at 146.920 kb on + strand at 146.920 kb on + strand at 146.920 kb on + strand at 146.924 kb on + strand at 146.924 kb on + strand at 146.956 kb on - strand at 147.049 kb on + strand, within H281DRAFT_05557 at 147.143 kb on + strand, within H281DRAFT_05557 at 147.144 kb on - strand, within H281DRAFT_05557 at 147.149 kb on + strand, within H281DRAFT_05557 at 147.149 kb on + strand, within H281DRAFT_05557 at 147.150 kb on - strand, within H281DRAFT_05557 at 147.203 kb on + strand, within H281DRAFT_05557 at 147.239 kb on + strand, within H281DRAFT_05557
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 144,689 - H281DRAFT_05555 0.44 +0.3 144,760 + H281DRAFT_05555 0.51 -0.2 144,763 - H281DRAFT_05555 0.52 +0.0 144,784 - +0.3 144,818 - H281DRAFT_05555 0.57 -0.7 145,059 + H281DRAFT_05555 0.81 -0.1 145,060 - H281DRAFT_05555 0.81 +0.1 145,371 - +0.8 145,425 + +0.1 145,425 + -0.3 145,426 - +0.1 145,440 - +0.3 145,440 - -0.1 145,440 - +0.5 145,440 - -0.4 145,477 - -1.9 145,517 - -0.3 145,517 - +0.0 145,550 - +0.5 145,551 + +0.9 145,551 + -0.3 145,750 + +2.5 145,751 - H281DRAFT_05556 0.34 -0.2 145,751 - H281DRAFT_05556 0.34 -0.3 145,827 + H281DRAFT_05556 0.44 +0.1 145,828 - H281DRAFT_05556 0.44 +0.4 146,119 - H281DRAFT_05556 0.83 +0.7 146,553 - +0.5 146,607 + -1.1 146,776 - +0.8 146,920 + +0.1 146,920 + -0.6 146,920 + +0.9 146,924 + -0.3 146,924 + -0.5 146,956 - -0.2 147,049 + H281DRAFT_05557 0.14 +0.1 147,143 + H281DRAFT_05557 0.21 -0.4 147,144 - H281DRAFT_05557 0.21 +0.1 147,149 + H281DRAFT_05557 0.21 -0.3 147,149 + H281DRAFT_05557 0.21 -0.9 147,150 - H281DRAFT_05557 0.21 +0.3 147,203 + H281DRAFT_05557 0.25 +0.3 147,239 + H281DRAFT_05557 0.28 +0.7
Or see this region's nucleotide sequence