Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05388 and H281DRAFT_05389 are separated by 214 nucleotides H281DRAFT_05389 and H281DRAFT_05390 are separated by 357 nucleotides H281DRAFT_05390 and H281DRAFT_05391 are separated by 67 nucleotides
H281DRAFT_05388: H281DRAFT_05388 - ribonucleoside-diphosphate reductase class II, at 148,923 to 151,508
_05388
H281DRAFT_05389: H281DRAFT_05389 - protein of unknown function (DUF3331), at 151,723 to 152,013
_05389
H281DRAFT_05390: H281DRAFT_05390 - Predicted PurR-regulated permease PerM, at 152,371 to 153,471
_05390
H281DRAFT_05391: H281DRAFT_05391 - S-formylglutathione hydrolase FrmB, at 153,539 to 154,411
_05391
Position (kb) 152
153
154 Strain fitness (log2 ratio) -2
-1
0
1
2 at 151.437 kb on + strand at 151.556 kb on + strand at 151.556 kb on + strand at 151.556 kb on + strand at 151.557 kb on - strand at 151.557 kb on - strand at 151.557 kb on - strand at 151.710 kb on + strand at 151.711 kb on - strand at 151.898 kb on + strand, within H281DRAFT_05389 at 152.025 kb on + strand at 152.046 kb on + strand at 152.046 kb on + strand at 152.046 kb on + strand at 152.103 kb on - strand at 152.176 kb on - strand at 152.176 kb on - strand at 152.176 kb on - strand at 152.180 kb on + strand at 152.181 kb on - strand at 152.181 kb on - strand at 152.181 kb on - strand at 152.181 kb on - strand at 152.259 kb on - strand at 152.298 kb on + strand at 152.298 kb on + strand at 152.298 kb on + strand at 152.299 kb on - strand at 152.358 kb on + strand at 152.359 kb on - strand at 152.476 kb on + strand at 152.477 kb on - strand at 152.477 kb on - strand at 152.815 kb on + strand, within H281DRAFT_05390 at 152.815 kb on + strand, within H281DRAFT_05390 at 152.816 kb on - strand, within H281DRAFT_05390 at 152.816 kb on - strand, within H281DRAFT_05390 at 152.816 kb on - strand, within H281DRAFT_05390 at 153.470 kb on - strand at 153.597 kb on + strand at 153.597 kb on + strand at 153.629 kb on + strand, within H281DRAFT_05391 at 153.629 kb on + strand, within H281DRAFT_05391 at 153.629 kb on + strand, within H281DRAFT_05391 at 153.700 kb on - strand, within H281DRAFT_05391 at 153.783 kb on + strand, within H281DRAFT_05391 at 153.784 kb on - strand, within H281DRAFT_05391 at 153.898 kb on - strand, within H281DRAFT_05391 at 153.898 kb on - strand, within H281DRAFT_05391 at 153.898 kb on - strand, within H281DRAFT_05391 at 154.027 kb on - strand, within H281DRAFT_05391 at 154.027 kb on - strand, within H281DRAFT_05391 at 154.095 kb on + strand, within H281DRAFT_05391 at 154.095 kb on + strand, within H281DRAFT_05391 at 154.233 kb on + strand, within H281DRAFT_05391 at 154.233 kb on + strand, within H281DRAFT_05391 at 154.233 kb on + strand, within H281DRAFT_05391 at 154.234 kb on - strand, within H281DRAFT_05391 at 154.234 kb on - strand, within H281DRAFT_05391 at 154.290 kb on + strand, within H281DRAFT_05391 at 154.291 kb on - strand, within H281DRAFT_05391 at 154.398 kb on - strand at 154.419 kb on + strand at 154.458 kb on + strand at 154.459 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 151,437 + +0.7 151,556 + +0.4 151,556 + +0.9 151,556 + +1.5 151,557 - -0.1 151,557 - -0.9 151,557 - +0.1 151,710 + +0.5 151,711 - -1.8 151,898 + H281DRAFT_05389 0.60 +0.6 152,025 + +0.7 152,046 + -0.6 152,046 + +0.2 152,046 + +0.8 152,103 - +1.0 152,176 - -0.3 152,176 - -1.1 152,176 - -0.2 152,180 + -2.4 152,181 - +0.7 152,181 - -1.1 152,181 - -1.6 152,181 - +0.6 152,259 - +0.4 152,298 + -0.3 152,298 + -1.1 152,298 + +1.6 152,299 - +0.4 152,358 + +1.8 152,359 - -0.0 152,476 + +0.1 152,477 - +0.2 152,477 - +0.2 152,815 + H281DRAFT_05390 0.40 -2.2 152,815 + H281DRAFT_05390 0.40 +0.4 152,816 - H281DRAFT_05390 0.40 -0.2 152,816 - H281DRAFT_05390 0.40 -0.6 152,816 - H281DRAFT_05390 0.40 -0.0 153,470 - +0.5 153,597 + -0.6 153,597 + -0.0 153,629 + H281DRAFT_05391 0.10 -0.7 153,629 + H281DRAFT_05391 0.10 +0.2 153,629 + H281DRAFT_05391 0.10 +0.5 153,700 - H281DRAFT_05391 0.18 +0.2 153,783 + H281DRAFT_05391 0.28 -0.1 153,784 - H281DRAFT_05391 0.28 -0.2 153,898 - H281DRAFT_05391 0.41 +0.4 153,898 - H281DRAFT_05391 0.41 +1.2 153,898 - H281DRAFT_05391 0.41 +1.0 154,027 - H281DRAFT_05391 0.56 -0.6 154,027 - H281DRAFT_05391 0.56 -1.6 154,095 + H281DRAFT_05391 0.64 +0.6 154,095 + H281DRAFT_05391 0.64 +0.3 154,233 + H281DRAFT_05391 0.79 +1.1 154,233 + H281DRAFT_05391 0.79 -1.0 154,233 + H281DRAFT_05391 0.79 +0.1 154,234 - H281DRAFT_05391 0.80 +1.0 154,234 - H281DRAFT_05391 0.80 +0.7 154,290 + H281DRAFT_05391 0.86 +1.1 154,291 - H281DRAFT_05391 0.86 -0.3 154,398 - -0.8 154,419 + +0.4 154,458 + +0.8 154,459 - -0.6
Or see this region's nucleotide sequence