Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04150 and H281DRAFT_04151 are separated by 123 nucleotides H281DRAFT_04151 and H281DRAFT_04152 are separated by 371 nucleotides
H281DRAFT_04150: H281DRAFT_04150 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 260,968 to 261,921
_04150
H281DRAFT_04151: H281DRAFT_04151 - transcriptional regulator, AraC family, at 262,045 to 263,025
_04151
H281DRAFT_04152: H281DRAFT_04152 - D-arabinitol 4-dehydrogenase, at 263,397 to 264,809
_04152
Position (kb) 262
263
264 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 261.347 kb on - strand, within H281DRAFT_04150 at 261.461 kb on - strand, within H281DRAFT_04150 at 261.464 kb on + strand, within H281DRAFT_04150 at 261.465 kb on - strand, within H281DRAFT_04150 at 261.886 kb on - strand at 262.039 kb on + strand at 262.046 kb on + strand at 262.340 kb on + strand, within H281DRAFT_04151 at 263.103 kb on + strand at 263.103 kb on + strand at 263.104 kb on - strand at 263.382 kb on + strand at 263.604 kb on + strand, within H281DRAFT_04152 at 263.604 kb on + strand, within H281DRAFT_04152 at 263.606 kb on + strand, within H281DRAFT_04152 at 263.606 kb on + strand, within H281DRAFT_04152 at 263.607 kb on - strand, within H281DRAFT_04152 at 263.764 kb on - strand, within H281DRAFT_04152 at 263.766 kb on + strand, within H281DRAFT_04152 at 263.767 kb on - strand, within H281DRAFT_04152 at 263.767 kb on - strand, within H281DRAFT_04152 at 263.767 kb on - strand, within H281DRAFT_04152 at 263.834 kb on + strand, within H281DRAFT_04152 at 263.834 kb on + strand, within H281DRAFT_04152 at 263.834 kb on + strand, within H281DRAFT_04152 at 263.834 kb on + strand, within H281DRAFT_04152 at 263.835 kb on - strand, within H281DRAFT_04152 at 263.835 kb on - strand, within H281DRAFT_04152 at 263.844 kb on + strand, within H281DRAFT_04152
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 261,347 - H281DRAFT_04150 0.40 -0.4 261,461 - H281DRAFT_04150 0.52 +1.2 261,464 + H281DRAFT_04150 0.52 -1.4 261,465 - H281DRAFT_04150 0.52 +0.8 261,886 - -3.4 262,039 + -0.3 262,046 + +0.5 262,340 + H281DRAFT_04151 0.30 +0.5 263,103 + +0.2 263,103 + -2.0 263,104 - -0.3 263,382 + -1.2 263,604 + H281DRAFT_04152 0.15 -0.2 263,604 + H281DRAFT_04152 0.15 -1.6 263,606 + H281DRAFT_04152 0.15 -0.6 263,606 + H281DRAFT_04152 0.15 +2.0 263,607 - H281DRAFT_04152 0.15 +0.6 263,764 - H281DRAFT_04152 0.26 -0.7 263,766 + H281DRAFT_04152 0.26 -0.8 263,767 - H281DRAFT_04152 0.26 +1.0 263,767 - H281DRAFT_04152 0.26 -1.6 263,767 - H281DRAFT_04152 0.26 -0.8 263,834 + H281DRAFT_04152 0.31 +0.5 263,834 + H281DRAFT_04152 0.31 -0.1 263,834 + H281DRAFT_04152 0.31 +0.5 263,834 + H281DRAFT_04152 0.31 -1.6 263,835 - H281DRAFT_04152 0.31 -1.6 263,835 - H281DRAFT_04152 0.31 -0.4 263,844 + H281DRAFT_04152 0.32 -1.1
Or see this region's nucleotide sequence