Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03986 and H281DRAFT_03987 are separated by 80 nucleotides H281DRAFT_03987 and H281DRAFT_03988 are separated by 187 nucleotides
H281DRAFT_03986: H281DRAFT_03986 - Putative Ca2+/H+ antiporter, TMEM165/GDT1 family, at 92,608 to 93,225
_03986
H281DRAFT_03987: H281DRAFT_03987 - protein of unknown function (DUF4136), at 93,306 to 94,016
_03987
H281DRAFT_03988: H281DRAFT_03988 - alanyl aminopeptidase. Metallo peptidase. MEROPS family M01, at 94,204 to 96,978
_03988
Position (kb) 93
94
95 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 92.360 kb on + strand at 92.419 kb on + strand at 92.420 kb on - strand at 92.420 kb on - strand at 92.766 kb on + strand, within H281DRAFT_03986 at 92.875 kb on - strand, within H281DRAFT_03986 at 92.922 kb on - strand, within H281DRAFT_03986 at 93.425 kb on + strand, within H281DRAFT_03987 at 93.478 kb on + strand, within H281DRAFT_03987 at 93.478 kb on + strand, within H281DRAFT_03987 at 93.479 kb on - strand, within H281DRAFT_03987 at 93.479 kb on - strand, within H281DRAFT_03987 at 93.479 kb on - strand, within H281DRAFT_03987 at 93.479 kb on - strand, within H281DRAFT_03987 at 93.536 kb on - strand, within H281DRAFT_03987 at 93.653 kb on - strand, within H281DRAFT_03987 at 93.694 kb on + strand, within H281DRAFT_03987 at 93.694 kb on + strand, within H281DRAFT_03987 at 93.694 kb on + strand, within H281DRAFT_03987 at 93.695 kb on - strand, within H281DRAFT_03987 at 93.695 kb on - strand, within H281DRAFT_03987 at 93.695 kb on - strand, within H281DRAFT_03987 at 93.697 kb on + strand, within H281DRAFT_03987 at 93.697 kb on + strand, within H281DRAFT_03987 at 93.698 kb on - strand, within H281DRAFT_03987 at 93.698 kb on - strand, within H281DRAFT_03987 at 93.739 kb on + strand, within H281DRAFT_03987 at 93.757 kb on + strand, within H281DRAFT_03987 at 93.757 kb on + strand, within H281DRAFT_03987 at 93.826 kb on + strand, within H281DRAFT_03987 at 93.827 kb on - strand, within H281DRAFT_03987 at 93.827 kb on - strand, within H281DRAFT_03987 at 93.827 kb on - strand, within H281DRAFT_03987 at 93.937 kb on + strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 93.938 kb on - strand, within H281DRAFT_03987 at 94.055 kb on + strand at 94.055 kb on + strand at 94.056 kb on - strand at 94.056 kb on - strand at 94.061 kb on - strand at 94.064 kb on + strand at 94.064 kb on + strand at 94.110 kb on + strand at 94.110 kb on + strand at 94.110 kb on + strand at 94.111 kb on - strand at 94.200 kb on + strand at 94.201 kb on - strand at 94.201 kb on - strand at 94.316 kb on - strand at 94.446 kb on - strand at 94.610 kb on + strand, within H281DRAFT_03988 at 94.612 kb on + strand, within H281DRAFT_03988 at 94.612 kb on + strand, within H281DRAFT_03988 at 94.613 kb on - strand, within H281DRAFT_03988 at 94.672 kb on + strand, within H281DRAFT_03988 at 94.672 kb on + strand, within H281DRAFT_03988 at 94.673 kb on - strand, within H281DRAFT_03988 at 94.673 kb on - strand, within H281DRAFT_03988 at 94.673 kb on - strand, within H281DRAFT_03988 at 94.673 kb on - strand, within H281DRAFT_03988 at 94.705 kb on + strand, within H281DRAFT_03988 at 94.705 kb on + strand, within H281DRAFT_03988 at 94.705 kb on + strand, within H281DRAFT_03988 at 94.705 kb on + strand, within H281DRAFT_03988 at 94.837 kb on + strand, within H281DRAFT_03988 at 94.838 kb on - strand, within H281DRAFT_03988 at 94.922 kb on + strand, within H281DRAFT_03988
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 92,360 + -0.0 92,419 + -0.5 92,420 - +2.7 92,420 - +0.9 92,766 + H281DRAFT_03986 0.26 +1.1 92,875 - H281DRAFT_03986 0.43 +1.0 92,922 - H281DRAFT_03986 0.51 +0.2 93,425 + H281DRAFT_03987 0.17 +0.7 93,478 + H281DRAFT_03987 0.24 -0.5 93,478 + H281DRAFT_03987 0.24 +0.6 93,479 - H281DRAFT_03987 0.24 +0.4 93,479 - H281DRAFT_03987 0.24 +0.6 93,479 - H281DRAFT_03987 0.24 +0.0 93,479 - H281DRAFT_03987 0.24 -0.3 93,536 - H281DRAFT_03987 0.32 -0.6 93,653 - H281DRAFT_03987 0.49 +0.1 93,694 + H281DRAFT_03987 0.55 +0.2 93,694 + H281DRAFT_03987 0.55 +0.5 93,694 + H281DRAFT_03987 0.55 -2.2 93,695 - H281DRAFT_03987 0.55 -1.6 93,695 - H281DRAFT_03987 0.55 -3.0 93,695 - H281DRAFT_03987 0.55 +0.3 93,697 + H281DRAFT_03987 0.55 +0.8 93,697 + H281DRAFT_03987 0.55 +0.9 93,698 - H281DRAFT_03987 0.55 +0.7 93,698 - H281DRAFT_03987 0.55 +0.2 93,739 + H281DRAFT_03987 0.61 +0.7 93,757 + H281DRAFT_03987 0.63 -0.3 93,757 + H281DRAFT_03987 0.63 +0.8 93,826 + H281DRAFT_03987 0.73 +0.1 93,827 - H281DRAFT_03987 0.73 +0.7 93,827 - H281DRAFT_03987 0.73 +0.2 93,827 - H281DRAFT_03987 0.73 +0.1 93,937 + H281DRAFT_03987 0.89 -0.0 93,938 - H281DRAFT_03987 0.89 -0.1 93,938 - H281DRAFT_03987 0.89 +0.9 93,938 - H281DRAFT_03987 0.89 -0.9 93,938 - H281DRAFT_03987 0.89 -0.0 93,938 - H281DRAFT_03987 0.89 +0.6 94,055 + -0.9 94,055 + +0.5 94,056 - +0.1 94,056 - +0.0 94,061 - -2.3 94,064 + -0.0 94,064 + -0.1 94,110 + -0.5 94,110 + +0.3 94,110 + -0.5 94,111 - +0.7 94,200 + -0.6 94,201 - -0.2 94,201 - +0.8 94,316 - +1.3 94,446 - -0.9 94,610 + H281DRAFT_03988 0.15 -0.9 94,612 + H281DRAFT_03988 0.15 +0.8 94,612 + H281DRAFT_03988 0.15 +0.6 94,613 - H281DRAFT_03988 0.15 +0.4 94,672 + H281DRAFT_03988 0.17 +0.2 94,672 + H281DRAFT_03988 0.17 -0.5 94,673 - H281DRAFT_03988 0.17 -0.2 94,673 - H281DRAFT_03988 0.17 -0.4 94,673 - H281DRAFT_03988 0.17 +0.4 94,673 - H281DRAFT_03988 0.17 +0.4 94,705 + H281DRAFT_03988 0.18 +0.2 94,705 + H281DRAFT_03988 0.18 +0.7 94,705 + H281DRAFT_03988 0.18 -2.2 94,705 + H281DRAFT_03988 0.18 +0.6 94,837 + H281DRAFT_03988 0.23 +0.5 94,838 - H281DRAFT_03988 0.23 -0.1 94,922 + H281DRAFT_03988 0.26 +0.3
Or see this region's nucleotide sequence