Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03112 and H281DRAFT_03113 are separated by 129 nucleotides H281DRAFT_03113 and H281DRAFT_03114 are separated by 69 nucleotides H281DRAFT_03114 and H281DRAFT_03115 overlap by 64 nucleotides H281DRAFT_03115 and H281DRAFT_03116 overlap by 37 nucleotides
H281DRAFT_03112: H281DRAFT_03112 - Inosine-uridine nucleoside N-ribohydrolase, at 146,532 to 147,497
_03112
H281DRAFT_03113: H281DRAFT_03113 - 2-dehydropantoate 2-reductase, at 147,627 to 148,562
_03113
H281DRAFT_03114: H281DRAFT_03114 - hypothetical protein, at 148,632 to 148,931
_03114
H281DRAFT_03115: H281DRAFT_03115 - hypothetical protein, at 148,868 to 149,044
_03115
H281DRAFT_03116: H281DRAFT_03116 - putative spermidine/putrescine transport system substrate-binding protein, at 149,008 to 150,054
_03116
Position (kb) 147
148
149 Strain fitness (log2 ratio) -2
-1
0
1 at 146.633 kb on - strand, within H281DRAFT_03112 at 147.151 kb on - strand, within H281DRAFT_03112 at 147.151 kb on - strand, within H281DRAFT_03112 at 147.258 kb on + strand, within H281DRAFT_03112 at 147.259 kb on - strand, within H281DRAFT_03112 at 147.285 kb on + strand, within H281DRAFT_03112 at 147.285 kb on + strand, within H281DRAFT_03112 at 147.286 kb on - strand, within H281DRAFT_03112 at 147.286 kb on - strand, within H281DRAFT_03112 at 147.383 kb on + strand, within H281DRAFT_03112 at 147.666 kb on + strand at 148.102 kb on + strand, within H281DRAFT_03113 at 148.246 kb on + strand, within H281DRAFT_03113 at 148.247 kb on - strand, within H281DRAFT_03113 at 148.247 kb on - strand, within H281DRAFT_03113 at 148.441 kb on + strand, within H281DRAFT_03113 at 148.534 kb on - strand at 148.560 kb on + strand at 148.726 kb on - strand, within H281DRAFT_03114 at 148.758 kb on - strand, within H281DRAFT_03114 at 149.064 kb on + strand at 149.313 kb on - strand, within H281DRAFT_03116 at 149.426 kb on + strand, within H281DRAFT_03116 at 149.427 kb on - strand, within H281DRAFT_03116
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 146,633 - H281DRAFT_03112 0.10 -1.2 147,151 - H281DRAFT_03112 0.64 -0.3 147,151 - H281DRAFT_03112 0.64 -1.9 147,258 + H281DRAFT_03112 0.75 +0.4 147,259 - H281DRAFT_03112 0.75 +0.3 147,285 + H281DRAFT_03112 0.78 +0.4 147,285 + H281DRAFT_03112 0.78 +0.1 147,286 - H281DRAFT_03112 0.78 +0.3 147,286 - H281DRAFT_03112 0.78 -0.3 147,383 + H281DRAFT_03112 0.88 +0.5 147,666 + +0.4 148,102 + H281DRAFT_03113 0.51 -1.2 148,246 + H281DRAFT_03113 0.66 -1.4 148,247 - H281DRAFT_03113 0.66 +0.5 148,247 - H281DRAFT_03113 0.66 +0.1 148,441 + H281DRAFT_03113 0.87 -0.7 148,534 - +0.9 148,560 + -0.2 148,726 - H281DRAFT_03114 0.31 +0.2 148,758 - H281DRAFT_03114 0.42 +0.9 149,064 + +1.6 149,313 - H281DRAFT_03116 0.29 -0.4 149,426 + H281DRAFT_03116 0.40 +1.1 149,427 - H281DRAFT_03116 0.40 -0.7
Or see this region's nucleotide sequence