Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03101 and H281DRAFT_03102 are separated by 253 nucleotides H281DRAFT_03102 and H281DRAFT_03103 are separated by 166 nucleotides
H281DRAFT_03101: H281DRAFT_03101 - CBS domain-containing membrane protein, at 135,064 to 136,230
_03101
H281DRAFT_03102: H281DRAFT_03102 - cyclopropane-fatty-acyl-phospholipid synthase, at 136,484 to 137,830
_03102
H281DRAFT_03103: H281DRAFT_03103 - hypothetical protein, at 137,997 to 139,049
_03103
Position (kb) 136
137
138 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 136.335 kb on - strand at 136.554 kb on + strand at 136.555 kb on - strand at 136.560 kb on + strand at 136.561 kb on - strand at 136.710 kb on + strand, within H281DRAFT_03102 at 136.889 kb on + strand, within H281DRAFT_03102 at 137.215 kb on + strand, within H281DRAFT_03102 at 137.448 kb on + strand, within H281DRAFT_03102 at 137.640 kb on + strand, within H281DRAFT_03102 at 137.640 kb on + strand, within H281DRAFT_03102 at 137.641 kb on - strand, within H281DRAFT_03102 at 137.949 kb on + strand at 138.062 kb on + strand at 138.101 kb on - strand at 138.136 kb on - strand, within H281DRAFT_03103 at 138.143 kb on + strand, within H281DRAFT_03103 at 138.331 kb on - strand, within H281DRAFT_03103 at 138.405 kb on - strand, within H281DRAFT_03103 at 138.684 kb on + strand, within H281DRAFT_03103 at 138.801 kb on + strand, within H281DRAFT_03103
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 136,335 - -0.2 136,554 + -2.9 136,555 - -0.3 136,560 + -0.4 136,561 - -0.5 136,710 + H281DRAFT_03102 0.17 -0.8 136,889 + H281DRAFT_03102 0.30 -0.2 137,215 + H281DRAFT_03102 0.54 -1.7 137,448 + H281DRAFT_03102 0.72 -0.2 137,640 + H281DRAFT_03102 0.86 +0.4 137,640 + H281DRAFT_03102 0.86 +0.4 137,641 - H281DRAFT_03102 0.86 -0.5 137,949 + -0.5 138,062 + +0.2 138,101 - -0.7 138,136 - H281DRAFT_03103 0.13 +0.6 138,143 + H281DRAFT_03103 0.14 -0.5 138,331 - H281DRAFT_03103 0.32 +0.7 138,405 - H281DRAFT_03103 0.39 -1.6 138,684 + H281DRAFT_03103 0.65 -0.6 138,801 + H281DRAFT_03103 0.76 +0.4
Or see this region's nucleotide sequence