Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10585
Experiment: m.b. A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,094,751 | + | PGA1_c10580 | 0.54 | -0.5 | |
1,094,800 | + | PGA1_c10580 | 0.57 | +0.2 | |
1,095,232 | + | PGA1_c10580 | 0.83 | +0.1 | |
1,095,232 | + | PGA1_c10580 | 0.83 | +0.8 | |
1,095,323 | + | PGA1_c10580 | 0.89 | -0.3 | |
1,095,323 | + | PGA1_c10580 | 0.89 | +0.6 | |
1,095,338 | + | PGA1_c10580 | 0.90 | -0.1 | |
1,095,338 | + | PGA1_c10580 | 0.90 | -0.4 | |
1,095,346 | - | +0.7 | |||
1,095,387 | + | +1.4 | |||
1,095,494 | - | +0.0 | |||
1,095,529 | + | -0.0 | |||
1,095,589 | + | +0.2 | |||
1,095,767 | - | PGA1_c10585 | 0.40 | +0.3 | |
1,095,816 | + | PGA1_c10585 | 0.68 | +0.2 | |
1,095,822 | - | PGA1_c10585 | 0.72 | +0.7 | |
1,095,822 | - | PGA1_c10585 | 0.72 | -0.1 | |
1,095,822 | - | PGA1_c10585 | 0.72 | +0.4 | |
1,095,915 | - | +0.3 | |||
1,095,926 | - | +0.1 | |||
1,096,106 | + | -0.2 | |||
1,096,535 | - | PGA1_c10590 | 0.28 | +0.1 |
Or see this region's nucleotide sequence