Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2601 and DvMF_2602 overlap by 4 nucleotides DvMF_2602 and DvMF_2603 are separated by 510 nucleotides
DvMF_2601: DvMF_2601 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,286,232 to 3,287,632
_2601
DvMF_2602: DvMF_2602 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 3,287,629 to 3,290,469
_2602
DvMF_2603: DvMF_2603 - hypothetical protein (RefSeq), at 3,290,980 to 3,292,089
_2603
Position (kb)
3287
3288
3289
3290
3291 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3286.630 kb on - strand, within DvMF_2601 at 3286.656 kb on - strand, within DvMF_2601 at 3286.897 kb on + strand, within DvMF_2601 at 3286.965 kb on + strand, within DvMF_2601 at 3286.973 kb on - strand, within DvMF_2601 at 3286.973 kb on - strand, within DvMF_2601 at 3286.973 kb on - strand, within DvMF_2601 at 3287.121 kb on + strand, within DvMF_2601 at 3287.129 kb on - strand, within DvMF_2601 at 3287.129 kb on - strand, within DvMF_2601 at 3287.254 kb on - strand, within DvMF_2601 at 3287.290 kb on + strand, within DvMF_2601 at 3287.484 kb on + strand, within DvMF_2601 at 3287.506 kb on - strand at 3287.636 kb on - strand at 3287.643 kb on - strand at 3287.694 kb on + strand at 3287.985 kb on + strand, within DvMF_2602 at 3288.087 kb on + strand, within DvMF_2602 at 3288.587 kb on + strand, within DvMF_2602 at 3288.627 kb on - strand, within DvMF_2602 at 3288.670 kb on + strand, within DvMF_2602 at 3288.989 kb on - strand, within DvMF_2602 at 3289.012 kb on + strand, within DvMF_2602 at 3289.250 kb on + strand, within DvMF_2602 at 3289.386 kb on - strand, within DvMF_2602 at 3289.538 kb on - strand, within DvMF_2602 at 3289.746 kb on - strand, within DvMF_2602 at 3289.751 kb on - strand, within DvMF_2602 at 3290.039 kb on - strand, within DvMF_2602 at 3290.252 kb on + strand at 3290.290 kb on + strand at 3290.298 kb on - strand at 3290.325 kb on - strand at 3290.437 kb on + strand at 3290.593 kb on - strand at 3290.616 kb on - strand at 3290.786 kb on - strand at 3290.855 kb on + strand at 3290.863 kb on - strand at 3291.119 kb on - strand, within DvMF_2603
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.25 mg/ml remove 3,286,630 - DvMF_2601 0.28 -0.5 3,286,656 - DvMF_2601 0.30 -0.7 3,286,897 + DvMF_2601 0.47 -0.9 3,286,965 + DvMF_2601 0.52 -0.3 3,286,973 - DvMF_2601 0.53 -0.4 3,286,973 - DvMF_2601 0.53 -0.3 3,286,973 - DvMF_2601 0.53 -0.5 3,287,121 + DvMF_2601 0.63 -0.4 3,287,129 - DvMF_2601 0.64 -0.6 3,287,129 - DvMF_2601 0.64 -0.2 3,287,254 - DvMF_2601 0.73 -0.6 3,287,290 + DvMF_2601 0.76 +1.0 3,287,484 + DvMF_2601 0.89 -0.8 3,287,506 - -0.4 3,287,636 - -0.9 3,287,643 - -2.4 3,287,694 + -1.0 3,287,985 + DvMF_2602 0.13 -0.2 3,288,087 + DvMF_2602 0.16 -0.5 3,288,587 + DvMF_2602 0.34 -1.3 3,288,627 - DvMF_2602 0.35 -0.2 3,288,670 + DvMF_2602 0.37 -0.2 3,288,989 - DvMF_2602 0.48 +0.9 3,289,012 + DvMF_2602 0.49 +0.0 3,289,250 + DvMF_2602 0.57 -0.7 3,289,386 - DvMF_2602 0.62 -0.1 3,289,538 - DvMF_2602 0.67 +0.5 3,289,746 - DvMF_2602 0.75 -4.3 3,289,751 - DvMF_2602 0.75 -0.2 3,290,039 - DvMF_2602 0.85 +0.1 3,290,252 + -1.7 3,290,290 + -0.7 3,290,298 - +0.1 3,290,325 - +0.1 3,290,437 + -1.1 3,290,593 - -3.5 3,290,616 - -0.5 3,290,786 - +0.1 3,290,855 + +0.2 3,290,863 - +0.9 3,291,119 - DvMF_2603 0.13 -1.1
Or see this region's nucleotide sequence